SimpleSearch - Line and FST details


Line specific information

 
Line ID 058B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N405489)
Segregation Analysis 50:43:33
Confirmed for Hit At5g56670
Parent of DUPLO pair none
Parent of pair(s) 6928, 6933

Gene hit At5g56670

 
Sequence (A. th genome BLAST matches underlined) 
>34-K016087-022-058-B05-8409
GATATATCCTGCAATGTGTTATATCTGGACACTTGTGGTTCGATGTTTTAGACTATGGGA
TCCTCCGTATAGTGAG
GenBank Accession AL936694 [GenBank]
Graphic View Graphic view of gene At5g56670
Predicted Position of Insertion Chr5:22935593 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) MIK19
Hit Gene Code At5g56670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S30 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g08986

 
Sequence (A. th genome BLAST matches underlined) 
>34-K016086-022-058-B05-8409
TGATCTGANATTTCCCGGACATGNAGCCATTTACAATTGATATATCCTGAANTGTGTTAT
ATTGGAACACTTGTGGTTCGATGTTTTAGGCTATGGGATCGTCCCTATAGTGAGAGGAGT
CGAATATGACTTGATGTCATGTGTATGATTGAGTATAACAACTTAAACCGCAACCCGATC
TTAAAAGCCTAAGTAGTCTTTCCTTGTTAGAAGACACAAAGCCAAAGACTCATATGGACT
TTGGCTTCACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTAGTGTTTTGGAGTCA
AATATGACTTGATGTCCATGTGTATGATAGAGTATAAGAACTTAAACCGCATTCCGATCT
TATAAGCCTAAGTAGTGTTTCCTTGTTAGAACATACAAAGCCAAAGACTCATACGGACTT
TGGCTACACCATGAAAGCTTTGAGAAGCTATGGGATCCTCCCTTATAGTGAG
GenBank Accession AL936693 [GenBank]
Graphic View Graphic view of gene At2g08986
Predicted Position of Insertion Chr2:3623216 - go to primer design
BLAST e Value 9e-153
Hit Clone Code (BAC ID) T6C20
Hit Gene Code At2g08986 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37