SimpleSearch - Line and FST details


Line specific information

 
Line ID 058G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N405547)
Segregation Analysis 50:49:35
Confirmed for Hit At1g34520
Parent of DUPLO pair none
Parent of pair(s) 93920, 93928, 93930, 93931, 93933, 93934, 93935, 93936, 93937
Note

Gene hit At1g34490

 
Sequence (A. th genome BLAST matches underlined) 
>23-K016087-022-058-G03-8409
TGTCCTGAAATTTCCCGGACATGAAGCCATTTACAATTGATATATCCTGTCTGTGACAGT
AAGAGACAGAGATTATTGCAGAACCCCATACTTTGACGAAGCTCTTGAGTTCTTCCTCCA
TTTTGTTTTTCTTTTTCTGTTGCGTTGCTCAGTTTCTGCAATAACCTATGGGATCTCCNC
CTATAGTGA
GenBank Accession AL936769 [GenBank]
Graphic View Graphic view of gene At1g34490
Predicted Position of Insertion Chr1:12609547 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) F12K21
Hit Gene Code At1g34490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MBOAT (membrane bound O-acyl transferase) family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At1g34520

 
Sequence (A. th genome BLAST matches underlined) 
>23-K016086-022-058-G03-8409
TATCATGAAATTTCCCGGACATGAAGCCTTTACAATTGAATATATCCTGTCTGTGACAGT
AAGAGACAGAGATTATTGCAGAACCCCATACTTTGACGAAGCTCTTGAGTTCTTCCTCCA
TTTTGTTTTTCTTTTTCTGTTGCGTTGCTCAGTTTCTGCAATAACCTAGCAACAACTCCG
AGGCAATGAACACATGTCTTAAGGAAGGCAAAAGTGTATCCAATTGTCTATATGCTATGG
GATCCTCGNCCTATAGTGAGATACAGCATACGAATCTTCTTCAATGGCCATTTCCATTGA
TAGGCTTGATGGCTTTTTTACGATCAACCTTCCTTTTACACTATCTTCACATGAAATCGC
CCATATACTGAGCAATGGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTC
TCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGTAGACAAGCGTG
TCGTGCTCCACCATGTTGACGAAGATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGT
ATGAACTGTTCGCCAGTCTTTACGGCGAGTTCTGTTAGGTCCTCTATTTGAATCTTTGCC
CTCCATGGGAATTGGGGATCCTCTATGG
GenBank Accession FR801943 [GenBank]
Graphic View Graphic view of gene At1g34520
Predicted Position of Insertion Chr1:12623542 - go to primer design
BLAST e Value 3e-29
Hit Clone Code (BAC ID) F12K21
Hit Gene Code At1g34520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MBOAT (membrane bound O-acyl transferase) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37