SimpleSearch - Line and FST details


Line specific information

 
Line ID 060G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N405741)
Segregation Analysis 50:48:44
Confirmed for Hit At3g54300
Parent of DUPLO pair none
Parent of pair(s) 4970, 5026, 83624, 83630, 83639

Gene hit At3g54300

 
Sequence (A. th genome BLAST matches underlined) 
>39-K114295-0022-060-G05-8409
CCACACTTTTCTAGTTTTGAGAACGGTCTTGCATTATGACATAACGCTTGCCGACCTCTA
GATTTATGACTTAAATACGTTTTGGTAATAACGCTTGCGATATCGCCATATGGCACATTT
AACCCGTAGCACTACCATGGAAGTAAACCTATTTATTTGGTGTCTAATATCACTTCTAAC
CTGCCCGGCCGCTACTCNTCCTACGAGCGAGTTGGTTGTGCCATACTGCTGTTCCAACTC
ACGACATATCAGCTGTCGCTTTTGCACTTTGGACTAGGTTTC
GenBank Accession HE664247 [GenBank]
Graphic View Graphic view of gene At3g54300
Predicted Position of Insertion Chr3:20109185 - go to primer design
BLAST e Value 7e-15
Hit Clone Code (BAC ID) F24B22
Hit Gene Code At3g54300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vesicle-associated membrane protein 727
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR934519 [GenBank] CR770103 [GenBank] CR770103 [GenBank]


Last Updated on 10.06.2021 13:37