SimpleSearch - Line and FST details
Line specific information
| Line ID | 062A09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405865) |
| Segregation Analysis | 50:50:39 |
| Confirmed for Hit | At2g34490 At4g03364 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 9558, 61626, 93829 |
Gene hit At2g34490
| Sequence (A. th genome BLAST matches underlined) | >65-K016090-022-062-A09-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACTGTGATTTCCCGAGGCTGATACAAACT TTGTACTTAGCTCACACTTACGAGATTATTTACAGCTTTTGATCCATGTATGGAAATCGA CAATTTCTTCTTGCTACTCACAGAAATGAGACTCTACCCATGCACCTCTCTTAGAGCCTC GAATAATATGACTATGGGATCCTCTNCTATAGTGAGACTACTTCCTTCTGGTTCAAGCAA TCCGACACGGCAGGCACTTCCCCTGGCCTCGCTGCTAACTACCTCATCGGCAAATTCATC ATCTACATCAGAGACACAGAGCTTTCTCATCAAATATTCTCCAACGTTCGTCTTGAAGCT TTTCACCCTCTATGACATCCTTTGTATAAACAGATATTCGGTGATCATAGCCTAATCTAC TTGTTTGGTGAGGATCACAAAACTGTTCGCCGTCACCTTGCTCCTAACTTCACCCCCAAG GCACTCTCCACTTACTCTGATCTCCAACAAATAGTTATGCTCCGTCATCTACGACAGTGG AGAGGAAAGTTTCTCCGGCGGAACTAAGCCGGTTTCTATGCGAGACCTTGTCCGTGAACT CAATCTTGAGACTTCTCAAACGGTTTTCGTTGGACCCTACCTTGACAAGGAAGCTATGGG ACTCCCCCAAA |
| GenBank Accession | AL936910 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:14537363 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F13P17 |
| Hit Gene Code | At2g34490 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 710, subfamily A, polypeptide 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL936911 [GenBank] |
Gene hit At4g03364
| Sequence (A. th genome BLAST matches underlined) | >65-K016090-022-062-A09-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACTGTGATTTCCCGAGGCTGATACAAACT TTGTACTTAGCTCACACTTACGAGATTATTTACAGCTTTTGATCCATGTATGGAAATCGA CAATTTCTTCTTGCTACTCACAGAAATGAGACTCTACCCATGCACCTCTCTTAGAGCCTC GAATAATATGACTATGGGATCCTCTNCTATAGTGAGACTACTTCCTTCTGGTTCAAGCAA TCCGACACGGCAGGCACTTCCCCTGGCCTCGCTGCTAACTACCTCATCGGCAAATTCATC ATCTACATCAGAGACACAGAGCTTTCTCATCAAATATTCTCCAACGTTCGTCTTGAAGCT TTTCACCCTCTATGACATCCTTTGTATAAACAGATATTCGGTGATCATAGCCTAATCTAC TTGTTTGGTGAGGATCACAAAACTGTTCGCCGTCACCTTGCTCCTAACTTCACCCCCAAG GCACTCTCCACTTACTCTGATCTCCAACAAATAGTTATGCTCCGTCATCTACGACAGTGG AGAGGAAAGTTTCTCCGGCGGAACTAAGCCGGTTTCTATGCGAGACCTTGTCCGTGAACT CAATCTTGAGACTTCTCAAACGGTTTTCGTTGGACCCTACCTTGACAAGGAAGCTATGGG ACTCCCCCAAA |
| GenBank Accession | AL936910 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr4:1476695 - go to primer design |
| BLAST e Value | 6e-09 |
| Hit Clone Code (BAC ID) | F4C21 |
| Hit Gene Code | At4g03364 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | 3' region |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL936910 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
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