SimpleSearch - Line and FST details


Line specific information

 
Line ID 062C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N405882)
Segregation Analysis 50:48:43
Confirmed for Hit At4g18350
Parent of DUPLO pair none
Parent of pair(s) 4110, 4215, 4218, 4285

Gene hit At5g64580

 
Sequence (A. th genome BLAST matches underlined) 
>11-K016100-022-062-C02-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGATACTCATTGCTG
ATCCATCATATGTCAATTGAATTTTTTTTATTTCCATGTACTTTTTAAAAAAGTGAGATG
AGATTGTATCTACTTTCTTCTTTTTTGGATAGGCCCATGCCCTACACGATCCGGCAAATT
TGCATCAGTGAAATAAGAATAACAAAATATTTTATAAAAATGATCACGTTTGACATTTTT
CTCATCAAATAAACTATGGGATCCCCACTAGAGAGCGATGGGATCATCCCTATGTGGAGC
AGGATACTGAATAATCTCTAACGATTCACCTGGAGAGCTTTGATCATTTGATGCTCTTGA
GACCGCGAAACTGAACTGAAAAACAAAAAAGAAAGTGCACCCAACCAAAACTACAGTGCA
CCTTTCCGGGACCCTGCGGGTTGGCGTTGAAGGTATTCCACAACCGACATCCGGAAAACC
TTACAGAGACTTTAAAAGGAGAGGGGTGGCCTCCAAAATTGGGGGGCCTTCCTTCCTCCT
TCATTT
GenBank Accession AL936931 [GenBank]
Graphic View Graphic view of gene At5g64580
Predicted Position of Insertion Chr5:25816957 - go to primer design
BLAST e Value 4e-44
Hit Clone Code (BAC ID) MUB3
Hit Gene Code At5g64580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AAA-type ATPase family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At4g18350

 
Sequence (A. th genome BLAST matches underlined) 
>11-K016090-022-062-C02-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTTCATTCGAATATATCCTGAACAAATATA
TCCGTGGGCCGAACTGCACGCGGCCGGCTGTCACCAAGCTGTTTTCCGACAATATCACCG
GACCCAAGGGCTATCCGTCGCGGAGCTGGCCAGGATGCTTGACCACCTACGCCCTGGCGA
CGTTGAGTACAGTGACCAAGCTATGGGTATCCTCGNCTATAGTGAGATCCTCTCCGGCTA
AACATCTTCCAGAAAGCGGCGGCGATTGCGATCGACGCGGCTGAGCGTGCATTAATCTCA
CACGAGCAAGATTCTCCACTTCCCAAAACCGCTGATCCACGTGTTCAGATTGCCGGGAAT
TATTCCCCGGTACCGGAATCTTCCGTCCGGCGAAACCTCACCGTCGAAGGAACAATCCCT
GACTGCATTGACGGTGTTTATATCCGTAACGGCGCGAATCCGATGTTTGAGCCAACAGCT
GGGCACCATTTATTCGACGGAGACGGAATGGTTCACGCAGTTAAAATAACCAACGGTTCA
GCTATGGG
GenBank Accession AL936930 [GenBank]
Graphic View Graphic view of gene At4g18350
Predicted Position of Insertion Chr4:10142697 - go to primer design
BLAST e Value 1e-179
Hit Clone Code (BAC ID) T9A21
Hit Gene Code At4g18350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nine-cis-epoxycarotenoid dioxygenase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37