SimpleSearch - Line and FST details
Line specific information
| Line ID | 062C10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405890) |
| Segregation Analysis | 100:98:74 |
| Confirmed for Hit | At4g26640 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 80957 |
Gene hit At4g10740
| Sequence (A. th genome BLAST matches underlined) | >75-K016100-022-062-C10-8409 TGTCCTGTAGATTTCGTGATTGCTGCTATGATTTTCCACTCTAAAATGAGAGGGCGTTGT TGCCTTCATTTGTAGGTGTAACAGATTATGAAACATGCCATGGTCTCTCCAGGGTTTTGC TCGCTCGCGATGAGAGAGGTGTCTGTTTAGGACAAAATTGTGCACACGGCCGAGGAGCCT TGTAAAACATGATAAACGCCGTTGAACGGATATTGTTTCCGCCGGTGTGCGTAAGGTCCA TCTTCCGCAACGAGTATACTAACTGATGGAAACCTTAATGACCTATGGGATTCTCTACTG TAATGCGACCTGTTCTTAGGCTAATTTCGCATCGGAGAGCATAGTTATGAACATCTCTGC CTTCCCTTTCACTTGTACGGCGATACTATCTGCCTTGGATCCGCCTGGTCTGCCCCTAAT ACGGATTCTGAGCTGGGTCCTAACATCTCGTCTCTTACGATGCCTAATACTGAGCCCTCG CTATGACATACTTAAGACCTCTCGCCTTGTTATCAACCCTGTAGGCAGGTAAGTTTACCT ATGGGATCCTGCCTATAGTGAAGANCCANACCCCTCTTTTTTTCCCCCCCCGTGCCTTTC TTTCTTTTGCA |
| GenBank Accession | FR802018 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:6617680 - go to primer design |
| BLAST e Value | 7e-21 |
| Hit Clone Code (BAC ID) | T12H20 |
| Hit Gene Code | At4g10740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box and associated interaction domains-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At4g26640
| Sequence (A. th genome BLAST matches underlined) | >75-K016090-022-062-C10-8409 TATAGTGAGAGATCGNGTTTGCCTTCGTATGTTGTTATTACTGCTTTTGGATCATGTGAT GCTCTCTCCACGTGTTTTCTCACTGGGCATCCATGAGCTGTGCATTTGTAGTAGCTCCTA CAAAAGGCCGAGGAACATCATGAAACATAATATCTCCATTGCGCACATGTTGAGTCTGTT AAGATCACTATCTTCCATATTCCAAACCAAATTCCTAAAAGAAGCAACACTTTATGCACA TGTCAAATAACTAGGTCCTGAAGACAAGGACTAAACTGTTCTATGGGATCCTCCCTATAG TGAGANNAAANNNACNGACGCCTTCCCAATTTTTTTTCACCTCAAAAATGTACATGTCCA CACCCGCATTATAAAAAACCAAGGCATCCGTAAATCGCGGTACCCGTGACACCCGACCTA ATCCCAACAATAAACAGCCAAGCCCAATCCATAAACCCAATTTATCCAAAAAGCGGCCAA CGCACCCTAAAACAATAATCCCCCCCAACGCCCCAAATAACGCCCACCCCGATACCTCAA CCCAAAATAATAGGGGCCCCAAAAACTTTACCAACGAGGCAAGAGGGGTCAAGATTTCGA CCCGTAAATCGCAAAACACATCGTCGACCAAAAAAAAAAGGATTGTCCGACCAACCCGCC CCATCCCCACCACATTATATACGCTCCCGTCTCATCTACCCTCTAAAACAGCCCAATCCA TAGTAACCCCTGCCTATAAAAAACAAAACACCCCCAA |
| GenBank Accession | BX942864 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:13437663 - go to primer design |
| BLAST e Value | 1e-148 |
| Hit Clone Code (BAC ID) | T15N24 |
| Hit Gene Code | At4g26640 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | WRKY family transcription factor family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX942864 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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