SimpleSearch - Line and FST details


Line specific information

 
Line ID 062H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N405941)
Segregation Analysis 60:57:43
Confirmed for Hit At1g03365
Parent of DUPLO pair 12756
Parent of pair(s) none

Gene hit At1g03365

 
Sequence (A. th genome BLAST matches underlined) 
>08-K016100-022-062-H01-8409
TATCTCTTTTTTATACTGTCTTTTCAGAAAGATATCAATTTTTCATCTGAGACTATGGGA
TCCTCCCTATAGTGAGATTAAAACAGACATTTTGATTTTATCCCAAAAAAGGTGAGAGAG
TATGGGATCCTCCCTAAATAGAGAGAAAGTTTCTTTAGCTGAGGATAGCGGCTGCTTTGT
AAGAAAGAAAGTAAGTTGGATTCACTTGTGGTATTAGGTATATGTAAAGGGCTATATTAC
TGTGTTACAGAATAAGGAATCTTCCCTTGAGGGAGTTCCTTATTCTCATCCCGAATTACC
TCATACGTCTCTATGAGATCGTCCAACTTCGTTGCCATACTAATTATCTTCCCCTTGTAC
TCTGCGGTGGTACGAGAATCCCCCACCGTGATCTTATGACTCTCTTCATTCAAATGCGTC
CTTTTTCCTTTTACCTCTTTGACCTGAACATATCCACCTTTGGGCTCCCTTCCTATTATT
AGTGTTCGGCTCCCTTCCCCCCTTTCCACCTTTCATGCCGGCCGCGCCCGTAAAAACGTT
ACCCCATCGCACCCGTTTATATTCCCCCCACTTTCACGTTTCTTTTGTTTTTCCCCTGCC
CCCCTTTGCTCATTCCGCCTCTCTCGCTTGACGCCCTATTTTTTGCCTTTACATGTTTTG
ATTTACGTACCGCCGGCGTACAGCAGATTTTTTCACTGACCCTTTATCCCACTTTATGTG
TTTT
GenBank Accession FR802025 [GenBank]
Graphic View Graphic view of gene At1g03365
Predicted Position of Insertion Chr1:828223 - go to primer design
BLAST e Value 1e-22
Hit Clone Code (BAC ID) F15K9
Hit Gene Code At1g03365 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936979 [GenBank] FR802025 [GenBank]


Last Updated on 10.06.2021 13:37