SimpleSearch - Line and FST details


Line specific information

 
Line ID 065E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N406202)
Segregation Analysis 50:49:43
Confirmed for Hit At1g13280
Parent of DUPLO pair none
Parent of pair(s) 138, 97622, 97624

Gene hit At1g13280

 
Sequence (A. th genome BLAST matches underlined) 
>77-011560-strizhov-E10-oriL
AATTTTTTGTGGGTGTCTTTGTGATGGATCTTATTGGGCTGTTGTTCATTGAGTTTACCT
TTTAATAAAGGGCCTAAAGAATGAGCCTTTGATTTGGGCCGTACTCGTAAGCGTAATGTG
TCCCGTCCCTATAAACTGGATTTAAGCGCGTGAACTCCACCTTACGATATTTCTTTTTGA
TAGAGTATGTCAAATCCATGGATACTTTCTATCTTGGGAAAGTTTGGCTCACTAGGCTCG
CGGCCATGTTTGACCTAAAACTCATAAACGAATCTTTTTAATGTTCTTTCACCAAAGGCT
TATTTTGTATTTTTAATCCCATGAATCGGTTTTAAACATATAAATTTTATCTGGTATACA
CTTTTTTTCAGAAGAAAACCAATTTTGAGTAGCATAAAAGAGAAATCTATTTGCAACTGT
CCATTAATTAAGGACTTTGCTGTGGGATCCTCCCTATAGGGAGTCGTTTAACCTAAAANA
ANNCTTGCGACTATGGGATCCTCCCTATAGGAGTCGTATTAC
GenBank Accession AL755089 [GenBank]
Graphic View Graphic view of gene At1g13280
Predicted Position of Insertion Chr1:4548563 - go to primer design
BLAST e Value 1e-170
Hit Clone Code (BAC ID) T6J4
Hit Gene Code At1g13280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation allene oxide cyclase 4
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL755091 [GenBank] AL755089 [GenBank]


Last Updated on 10.06.2021 13:37