SimpleSearch - Line and FST details


Line specific information

 
Line ID 065H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N406238)
Segregation Analysis 50:48:38
Confirmed for Hit At3g20190
Parent of DUPLO pair none
Parent of pair(s) 94225, 94226, 94227

Gene hit At3g20190

 
Sequence (A. th genome BLAST matches underlined) 
>80-011560-strizhov-H10-oriL
ATGATCCATGTAGCATTTCCCGGACATGAAAGCATTTACAATTGAATATATCCTGAATCA
CTCGAACATGGGCTTAGTGGAGGACCACACAAGTTCTTGTTCCCTGCATTGTCAACAAAG
CAAGAAAGATTCTGTTTTTACATAAGAACTCCTATAGTTTACCAAACACTTTGCAGATGT
ACTTGAACTGTTTGTTTAATTACCTGAAAAGGAGACAGGATCCATGTTGCTAAGGCTTTC
CGGTATAGGTCCCTCGAGGTCATTGTTTTCGAAGCTATGGGATCCTCCCTATAGTGAGTC
TTATAACTCAGNNNNGGGNNANATTTTAAATCAAAACAATTATCGAGTAATAAAGAAAAT
CTAATTATGGGGAGGCCGGNTCTTTATGTGAACTAACCGTTTGTAAATTTTGGTTAGATG
CTGTGAAAAAGCCTCCAATGCTGGAAGGGGGGTTTTGTGTGGTGACAAAGCTTATTGGGG
GGACTCACTAGATGAGATATTTTTGCCTAAGACTGGAGTTATTCTTAAAACTAAATTTCG
TCGCCAGTAGACCTTGAAGATACAAAACTGAGGAGCCGGAGAATCCCCCTTGGGATACTT
CGTATAGTGAATGGGAAAGGCCTAGGGGCGGAAATTACTGGAGAACGGTATCCGGAGGTG
AAATGGGGAAAGAAAGAGAGTGCCATGTTTGGTCCTTCAAATGGAATTGCCACGGGTTTT
ATAAGAAGGNAGCGGAGCAACACCGACGGCGGAAGCNGGAGCGGCAGAGGCGACGCCGGA
AGGAANGAAGGGCGCAGGAAAAAATGCCGAGAGGAGNCGCCACTAACTGTCGACAGACCA
CCGCGGACGTGACCGCACGAGCGGCTAGAGGACCAACGACGCGGTGAGACGAGGGGGAGA
CAAAGGAGGAGGAAGAA
GenBank Accession AL755129 [GenBank]
Graphic View Graphic view of gene At3g20190
Predicted Position of Insertion Chr3:7045876 - go to primer design
BLAST e Value 1e-118
Hit Clone Code (BAC ID) MAL21
Hit Gene Code At3g20190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37