SimpleSearch - Line and FST details
Line specific information
| Line ID | 066C12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N406276) |
| Segregation Analysis | 100:100:77 |
| Confirmed for Hit | At3g04290 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3491, 3635, 8212 |
Gene hit F17M19
| Sequence (A. th genome BLAST matches underlined) | >91-011694-strizhov-C12-oriL NTTTGGATCCATGTAGATTGCTCCGGACATGAAACGCCCGGTAGACGAGATGTCTAATTG AAACTGCGTTGTGTCACTCTCATCTACTCTTTTTGACTACGGACCTCATCTTATAGCTGA GCCGAAACCAATTCATTTAAAACTTTATAATAGCGTAAAACCTCTGAACTTCAGACAAGT TCCAACTTTCGCATATCTTATAGGGATCATGGTAAAAATGGGCAAAAGTTAAACCTGATT CGCATTACAAACAGAGGATTACGAGCATAAGGGCTATAACCTATATATTACCTAAAAAAG AAAACTAGGGGATCCTCCGTATAGGGAGTCGTATTACTCAAATGGCGTGTGCTTGAACTC ACAGCATATTTACCGATATTGGAGAAGATGATCTCATCCTCGCTGCTCCTCTTTCCTTCT TCGATCTTCTTGAACCATTTGTAAGTGTTAGACAGAACCATGGTCCATGTTCATAATAAG TCGAGATAAGGAAAAAAGGTTGATTCTCTGGTTTGCAGTTATCGCAGTGGACCANAAAAC AGAGCGAAAAAGCTTTTAAGGTGACCGGAGAGATTCTTGGCGTCTGAGTGGAATGCCTTC TTCTTATTTATATGCTTGGCTATCCGCACGGGAATATTACCGACGAACCTGCATAACAAT AGCGAATTACCGGCGGTTTCAACCTCTAAAACCTGCAGAGGGATTCAGAGACT |
| GenBank Accession | AL755157 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27064550 - go to primer design |
| BLAST e Value | 1e-167 |
| Hit Clone Code (BAC ID) | F17M19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g04290
| Sequence (A. th genome BLAST matches underlined) | >91-011691-strizhov-C12-35St ACTGGCGTAAGGGATGACGCACAATNCCCCTATCCTTCGCAAGACCCTTCCTCTATATAA GGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC TTCGGTTTAAACTATCAGTGTTTGCTACGATACCTTGTAGGTTATTACCTTGATGCCTCA CTGAAGGATATAGCATTCAGTATGTGAACTCGGCGATAATTACTTTCGTCATGCCACTAC GTGCATAGGCAATGCCATGACTCTCTTGCATAGAGTGATCATAGGCTCATCACGCGCGTA CGACTAATGATGGGGCAAACATAGTAGCTTTTGCCTGGTACACTTACTGATGTACTTAGT GACTCCTTGGATGGTGTAGGATCACATATAGGATTCTTGCCTAGGGCGTCGTTGAAATAC GAAACTCTACGAACTGGGTGCAAGACGAGTTTTGGTAACTGGAACTGGTGCAATGGGATG TGCTCCCGCGGAGCTGGCTCAGCATAGCCGCAATGGCGAGTGCTATGGCGCCCTCCAAAC AGCAGCCGCTTTGTTCAATCCGCAATTAGTTGATTTGATCGCATCAGTCAATGCTGAAAT TGGTCAAGACGGGTTTGTAGCAGCCAATGCCTATCAAATGAACATGGATTATCTATCTAA TCCTGAACATTTGGGTATTACAACCCATCTCTTTATAACTTTTTTGGT |
| GenBank Accession | AL755156 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1134974 - go to primer design |
| BLAST e Value | 6e-175 |
| Hit Clone Code (BAC ID) | T6K12 |
| Hit Gene Code | At3g04290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Li-tolerant lipase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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