SimpleSearch - Line and FST details


Line specific information

 
Line ID 066F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N406304)
Segregation Analysis 101:96:70
Confirmed for Hit At1g22990
Parent of DUPLO pair none
Parent of pair(s) 239, 3722, 8273, 91511, 91519, 91525

Gene hit At1g22990

 
Sequence (A. th genome BLAST matches underlined) 
>30-011694-strizhov-F4-oriL
NTTTGATCCATGATAGATTTCCCGGACATCGAAGCATTTACATGTGACCCATTACCTTAC
GTAATCCACTCATATGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTACATGGAGAC
GGGAAGGAACGAACCTTTGATGGAGGAAACAGCGTTGTTGACTTTGCGTCCGCATCCGTG
ACAGACGATCTTCACCTTAGTATTACCCGGCAGTTTATTACCTAAATCGTGAAAAGGCTA
TGCAACTAAAAAACGACGAACCATCAGATAAACGGATGCGCTGAGAGATCTCACTTACCT
GCATGACTTTACGTTACTTCCGTTCTCGCATAGCGACGTACACATGGCCAGAACCTCCTC
AGAGGGATAATCGAGAGCTCCCATGTTTACTGGCACAAGCGATCAGACATATGGAGAGGG
AGAGGGAGAGGGAGACATCTATCACATCCTCCCTATTGCGCGACGGGCTTCTCGCCCTGC
CCTTTTCTTGGCGTTTTCTTGTCGCGTGTTTTAGTCGCATAAAGTAAAATACTTGCGACT
TTGGGAATCCTCCTATAGGGAGTCGTATTACCTTACCNGAGCGCCCAGGGGGNGCTAGGG
TGCCAGAGGCCGTGCAGGAGCCAGAGGGTAATCAGGGGGGGGGGGAAAGAGTTGAAGACA
TTGTATACAAGAGGGATATATCTTGGGGCGCAAAGGGCGCGGAGAGGAGAGAGGAAGAAA
GAGA
GenBank Accession FR802132 [GenBank]
Graphic View Graphic view of gene At1g22990
Predicted Position of Insertion Chr1:8139547 - go to primer design
BLAST e Value 3e-60
Hit Clone Code (BAC ID) F19G10
Hit Gene Code At1g22990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Heavy metal transport/detoxification superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37