SimpleSearch - Line and FST details


Line specific information

 
Line ID 066H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N406330)
Segregation Analysis 100:91:85
Confirmed for Hit At3g49560
Parent of DUPLO pair 1950
Parent of pair(s) 9126, 9137

Gene hit At3g49360

 
Sequence (A. th genome BLAST matches underlined) 
>48-011694-strizhov-H6-oriL
NTTTTGATCCATGTAGCATTTCCCGGACATGAAGCCATTTACAATTGAATATACAATCAC
TACTGCTGTTATGCTAGGTGGGCTCAAGGTCCGGACCATATTATGAAAATACTTGGCGCA
TATGGGCATCCTCCCTATGGAGACTACGGTTTTACTCATTCTTTTTGGTTTGAAACCTTA
ATTGGGAAAAAAATTCTATAAACCGAGTCCTGAACATCCATTATTGACAATAGGAAGGAC
AATGCTATGGGATCCTCCCTATTGTGAAACATTCTACTCCAATCGTTTCTTATACCTTTC
TTCTGAAAGTAGATAACTCATTACAACCTTTTATTAGACCTTGCGACAATCTGGATATAT
TCTACATAACGCTATATCTACCGAAACCAAATCAAAGTTTTAAAGGAAGATAATGATCAT
AATTACTTCTCGAATTAGCACAAAAGCTCTATTGCATCTATGGGATCCTCCCTATAGAGA
GTCGTCTTACT
GenBank Accession FR802140 [GenBank]
Graphic View Graphic view of gene At3g49360
Predicted Position of Insertion Chr3:18304267 - go to primer design
BLAST e Value 1e-40
Hit Clone Code (BAC ID) F2K15
Hit Gene Code At3g49360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 6-phosphogluconolactonase 2
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g49560

 
Sequence (A. th genome BLAST matches underlined) 
>48-011694-strizhov-H6-oriL
NTTTTGATCCATGTAGCATTTCCCGGACATGAAGCCATTTACAATTGAATATACAATCAC
TACTGCTGTTATGCTAGGTGGGCTCAAGGTCCGGACCATATTATGAAAATACTTGGCGCA
TATGGGCATCCTCCCTATGGAGACTACGGTTTTACTCATTCTTTTTGGTTTGAAACCTTA
ATTGGGAAAAAAATTCTATAAACCGAGTCCTGAACATCCATTATTGACAATAGGAAGGAC
AATGCTATGGGATCCTCCCTATTGTGAAACATTCTACTCCAATCGTTTCTTATACCTTTC
TTCTGAAAGTAGATAACTCATTACAACCTTTTATTAGACCTTGCGACAATCTGGATATAT
TCTACATAACGCTATATCTACCGAAACCAAATCAAAGTTTTAAAGGAAGATAATGATCAT
AATTACTTCTCGAATTAGCACAAAAGCTCTATTGCATCTATGGGATCCTCCCTATAGAGA
GTCGTCTTACT
GenBank Accession FR802140 [GenBank]
Graphic View Graphic view of gene At3g49560
Predicted Position of Insertion Chr3:18371284 - go to primer design
BLAST e Value 1e-07
Hit Clone Code (BAC ID) T9C5
Hit Gene Code At3g49560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37