SimpleSearch - Line and FST details


Line specific information

 
Line ID 067D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N2031154)
Segregation Analysis 50:32:1
Confirmed for Hit At3g01260
Parent of DUPLO pair 12710
Parent of pair(s) none

Gene hit At3g01260

 
Sequence (A. th genome BLAST matches underlined) 
>04-011693-strizhov-D1-oriL
TTGATCCATGTAGTATTTCCCGGACATGAGAGCATTTAAACACTGATAGTTTAAACCGAG
AGGCGGGAAACGACATTCTGATCCCCGGGATATGGGATCCTCCCTATAGTGAGTCGTATT
ACTAATAGAAAAAAGAAGATATACAGATAAAGTTTTTAAGGATAAAAAACGAACCTTGAT
CGCCATCAGGACTTGTTGTGTATGTGAAAACAATATAAGGTTTTTTGCCATTATGTTTGT
GTTTCTTAACTCTCCAAATCACATCGCTAGACTCTTTCGTCCCACCTGATTAATTAGAGA
AAAATGTTAATTATGAATTTTGTCATTTATGATTTATGAAGTCCACTTAAATTAGAACGT
AATTAATTAAAACATATTTACCATGGATCGTGTTTTTGCCATCGTTTGCAGCGGCCTTTT
CCTTTTTACTGGCTACACGTGCCAACGTCACTCCACAAAAACCGTGTCAATCTGATACAA
AGCTAATTAAATCTCTTTTCAAGATCTGATACAAAAATTATTTTGACCTAAAAGTAAGGA
TTTTACTAACCATGGGGGCATTGACGCTGGCATAATCCCAAAACATGGCCTCTATTTTCC
CTGGAAATAACTCCAATTTCACTAAATAATATTTATGAATACCTATTGGGATCCTCCCTA
TAGGAGGCGATTATACTAANNNNNNNNNNNNCTTNNNGAATTGACGTNAAGGNNAGGANC
CCCTAATATTCTCATATTTTGATTAAGGGGAAATC
GenBank Accession AL755196 [GenBank]
Graphic View Graphic view of gene At3g01260
Predicted Position of Insertion Chr3:80988 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T4P13
Hit Gene Code At3g01260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Galactose mutarotase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37