SimpleSearch - Line and FST details


Line specific information

 
Line ID 068B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N406454)
Segregation Analysis 50:26:20
Confirmed for Hit At1g04120
Parent of DUPLO pair none
Parent of pair(s) 3088, 3216, 42779, 84548

Gene hit At1g04120

 
Sequence (A. th genome BLAST matches underlined) 
>74-011756-strizhov-B10-8409
NTTTGGATCCATGTAGACTTCCCTGACATGAANGCATTTACATGGAGATAAAACTTGATT
TTCCAGAGCCAACTGTGCCACAGACAGCCACACGCATACCCTTCTCCACTTTCATCTGAA
TCCCAGATAATGTCGGCCTTGAAGAAAAAGGGTCCCAACAAAACACACCATCTTTAATCT
CTATGGCTATATTCGAAAGTCCCCGTGGAATAACAACAGTTGCATCTTCTTGAAGTTCTT
CCTCCTGCAAGAACCCAGAAATCCTATCAAGAGAAACCTTTGTCTGAGCCATCATTGAAA
CCAGATCAGGAAAGTTCCGAAGTGGCTCCTGAAGAATTCTGAATGTCGCCAGAGCAGAAA
GAACACCTCCAGCGGTAAGTTGAGTGCCTATGGGATCCTCCCTATAGAGAGTCGTATTAC
TCACAAAAATGGGGGAACTCCAAAAGATAAAAGTAACAAAAGCCTGAAAAATTAAGGCTT
TGCGAAGCCAACCATACTCCTTTTCCCTCTTTTTTCCAATCTCACTCTATAACGAGCTTC
CCATGCCTGCAAGTTTCAGAACTTTCATGTTCCTAAGACACTTTGAGGGTTTCCTTATTT
TTTTATCTTTCGAAGACATCAACTTATCTTG
GenBank Accession AL755241 [GenBank]
Graphic View Graphic view of gene At1g04120
Predicted Position of Insertion Chr1:1068394 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F20D22
Hit Gene Code At1g04120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation multidrug resistance-associated protein 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL755241 [GenBank]


Last Updated on 10.06.2021 13:37