SimpleSearch - Line and FST details


Line specific information

 
Line ID 069H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N406622)
Segregation Analysis 50:47:47
Confirmed for Hit At3g21280
Parent of DUPLO pair 1186
Parent of pair(s) none

Gene hit At3g21280

 
Sequence (A. th genome BLAST matches underlined) 
>80-011759-strizhov-H10-8409
NTGATCCATGTAGAATTTCCCGGACATGAAGCCCTTTACAATTGAACGCTAATTAGCTGA
ATACTAGTTGACTCTATAACGGTTAGCGGCCCACTCTTTATGATAAATAACATTGTCGGT
TGCACTATATCGAATTATGTGTCCTTGAATCACTGTACTTAAACAAAATAATAGGATTGT
TACTGAAATCTAATGTCCTATAAACTATGGCACTCCTCCCTAAATCGTGTCCTGGTAGAC
CAACAGGAAGGTATATTCTCTAAAAACCGGTTCTCAACATCTTTCTTGTCTATGGGATCC
TCCCTATAGAGAGTCGATGTACTCAGGACCTGTGGGTTATGCAAGCGATCCCAAAAGCGG
ACCCCCTTTTTTCACAAAGATGAGACGCCTTGGAGGACCCGTGCTTTCCCAGAGACTTCC
AAAAAACATGCCAGATTGGAGAGCATTGAAACTCCTTGAGGTTTAAGACACTCCATCTTT
GTTCAAGGGGACAAAAGCCCTGTCATCTGCTGAAACATGATGAACTAATTATTCCTAATG
GAGGAACGTCTTTGACACCCCGTGTAACCTCAAAGTCTTCTTTGTCGCCAATTATGAAAA
GACCCCCTTTGGCATGTCAGCCTCTTGAACAACGAGAGAACTTATTTTATATTCTCGAAA
CTGGGGCCTCTTTAGAAGAGGGGGCCCCTTTAGGAAACCACCCTAATACATTCCTTTTTT
AAAAAACTTTAAC
GenBank Accession AL755359 [GenBank]
Graphic View Graphic view of gene At3g21280
Predicted Position of Insertion Chr3:7479003 - go to primer design
BLAST e Value 3e-20
Hit Clone Code (BAC ID) MXL8
Hit Gene Code At3g21280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ubiquitin carboxyl-terminal hydrolase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37