SimpleSearch - Line and FST details
Line specific information
| Line ID | 070F02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N406686) |
| Segregation Analysis | 50:17:15 |
| Confirmed for Hit | At3g46370 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6744, 6747, 10743, 10749, 10752, 72885, 73126, 73179, 73204, 73229, 73248, 73294, 73319, 73321, 73322, 73323, 73325, 73326, 73328, 73329, 73330, 73331, 73332, 73333, 73335, 73337, 73338 |
Gene hit At3g46370
| Sequence (A. th genome BLAST matches underlined) | >14-011732-strizhov-F2-oriL TTGATCCATGTAGAATTTCCCGGACATGAAGCCCTTTACATATTTGATTATATCCTGCGA ACTACAGTGAAATTTTTGTAATGGATATCAAACGTGATTTCAGGTGTACCATGTTAAATA TTGACTATGGGATCTCTACCCTATACGCGAGTCGTATTACTCAAAGAACCTGATATTGCG TTGTAACTATACTTTGGTAGAGACCTTAGTTCCAAGGTCGATATAATTGGCGTTGTTGTA CCTGTTTTGATAAGACACACATCTATGGGATCCTCCCTATAGTGAGTCGTATTACTC |
| GenBank Accession | AL768167 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17052369 - go to primer design |
| BLAST e Value | 2e-52 |
| Hit Clone Code (BAC ID) | F18L15 |
| Hit Gene Code | At3g46370 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Leucine-rich repeat protein kinase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g48720
| Sequence (A. th genome BLAST matches underlined) | >14-011733-strizhov-F2-35St NATTGGCGTAAGGGATGACGCACATATCCACTATCCTTCGCAAGACCCTTCCTCTATATA AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC CTTCGGTTTAAACTATCAGTGTGACCGGATCGGGTCAAAGAAACCGGATTGGTTAACAAA GTCAAACAAACAAATATTGACTTGAGTTTCAGATTCCAGTAAAATCAAACCGGATCGGGT CTGAATTTAAACCACCGGGTCGGCTCCATCTAAAATCTGAAGATCATCTCCGCCTTATCT TGTTGACTATCTCTGTACTACTTACGAGCGCAAGTGAGAGAGTAACAGAGAAACGTAGAG ATATAGCAAAATGGCTGCGACGCTTACTGGATCAGGGATTGCTCTATGGGATCCTCCCTA TAGTGAGTCG |
| GenBank Accession | AL768168 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:18049469 - go to primer design |
| BLAST e Value | 2e-147 |
| Hit Clone Code (BAC ID) | T8P19 |
| Hit Gene Code | At3g48720 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | HXXXD-type acyl-transferase family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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