SimpleSearch - Line and FST details


Line specific information

 
Line ID 071E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N406769)
Segregation Analysis 50:46:36
Confirmed for Hit At2g31710
Parent of DUPLO pair 12096
Parent of pair(s) none

Gene hit At2g31710

 
Sequence (A. th genome BLAST matches underlined) 
>05-011734-strizhov-E1-oriL
TTGATCCATGTANGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAAGGA
GCCGCCGGCTAAATTTACAATGTGTAGATGATCAAACTTCATTACATGAACTACGCGTCA
AAGACTAAACTGCCTTTGTTACAAGAAGTAAGGTTACAACCATAGAATAACCTCTTGTAG
CATTCCAGCTCCAACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAACNGAGNGGA
TTTCTTGCCGTGGTATCAGTCAATGTAGTTATTGTGTTTTACATCTGTCTGGCCCTGAAA
GAACCTGCGGATAAACACAAGCCAGACGCTTCGTTTGTTGCAGAGGCTAAAGACAGTGTT
AAGAAATTGACATCAGGAGTCACAAATACTGACCCTGCGCTGAAGAAACAAGAGTGAGAG
CTTGCCACATCCCATTTTTGTTAAACAAGGAACAGTGTCGAGATTGCATCATAAAGAGCA
GAGCTCAAGTTCTTGCAATGTATTGTGTGGTTGCTATGGGATCCTCCCTATAGTGAGTCG
GenBank Accession AL768236 [GenBank]
Graphic View Graphic view of gene At2g31710
Predicted Position of Insertion Chr2:13482415 - go to primer design
BLAST e Value 2e-147
Hit Clone Code (BAC ID) T9H9
Hit Gene Code At2g31710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37