SimpleSearch - Line and FST details


Line specific information

 
Line ID 072C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N406847)
Segregation Analysis 50:45:42
Confirmed for Hit At1g76460
Parent of DUPLO pair 2288
Parent of pair(s) none

Gene hit At1g76460

 
Sequence (A. th genome BLAST matches underlined) 
>51-011723-strizhov-C7-oriL
TTGATCCATGTAGTATTTCCCGGCACATGAAGCATTTACAATTGAATATATATCTACACT
AACATGGCAGAGTTGGCTTGCGTGGAACCGTATTATGCATAAACTTCATCGGTTCACACC
TATGGCAATCCTACTTATATGGATTAGTATGCACCTGAATTGATAAACGGGTGAATTCAC
TGCTCCAGGTACTCCATAGACCTGAAGGTATTGCATGACCCATGTATGGACTATATAAAC
CCTATGGGATCCTCCCTATAGTGAGTCTATTGACTCACCTCAATGGTATCATTGTTCCTT
CTATGGGATCCTCCCTATAGTGAGTCGTATTACTCANNNNNNNNNNNNNNNNTNNNNNNN
ANNNNNNNNNNNNNNAANANNANANANANNNTCANAATATNTTATATNATATGTAAATNT
CCGCACAATATTATAACCNTTTATAACTACTCACACTAATCCCTACAATACCTAATNACC
ATGGCTTTACCAAATTCAAGCTATCCCGGTCAAGAGAGCCTTTTATGAGTAGAGAGGGAC
TAAGATAGAGAGAAAAACGGCTACGGTCCGGAAAAAACATGTGTTTCGACCTGGATAAAA
ACGGTCTTTTTTTGCAAAAGAAAAAACACACA
GenBank Accession AL768300 [GenBank]
Graphic View Graphic view of gene At1g76460
Predicted Position of Insertion Chr1:28687302 - go to primer design
BLAST e Value 2e-36
Hit Clone Code (BAC ID) F15M4
Hit Gene Code At1g76460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37