SimpleSearch - Line and FST details


Line specific information

 
Line ID 074A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N407019)
Segregation Analysis 50:45:38
Confirmed for Hit At2g40960
Parent of DUPLO pair 8247
Parent of pair(s) none

Gene hit At2g40960

 
Sequence (A. th genome BLAST matches underlined) 
>81-011892-strizhov-A11-8409
NTGATCCATGTAGATTGTCCCGGACATGAAGCACTTTACAATTGAATATACCTGTAAATG
AATAGCATGAAGCAATGCTTTACATACCTGTAATTGCTGCGGTCATAGTCAGGGTCCTAT
CGATCTTTCTCTCTGTCTCTGAGAATTGCAATACGAGATGCAGGATTGCTCTTCCTATGG
GATCCTCCCTATAGTGAGTCGCTATTACTCATTACGTCAGTGGAGATATCACATCAATCC
ACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACGATGCTCCTCGTGGGTGGG
GGTCCATCTTTGGGACCACTGTCGGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCG
CAATGATGGCATTTGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAATAAAGTGACAG
ATAGCTGGGCAATGGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCA
ATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGTACACAAGCGTGTCG
TGCTCCACCCTGTTGACGAAGATTTTCTTCTTGTCATTGAGTCGGAAGAGACTCTGTATG
ACCTGTT
GenBank Accession AL768411 [GenBank]
Graphic View Graphic view of gene At2g40960
Predicted Position of Insertion Chr2:17096803 - go to primer design
BLAST e Value 3e-51
Hit Clone Code (BAC ID) T20B5
Hit Gene Code At2g40960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Single-stranded nucleic acid binding R3H protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37