SimpleSearch - Line and FST details


Line specific information

 
Line ID 076A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N407202)
Segregation Analysis 50:43:33
Confirmed for Hit At3g16860
Parent of DUPLO pair none
Parent of pair(s) 4053, 4056, 8387, 9927

Gene hit At3g16860

 
Sequence (A. th genome BLAST matches underlined) 
>09-011889-strizhov-A2-8409
ACACTGACTTAACCGGGGCCATGATTAAACCAACGACACGAAGAACCAGCTCGTACCGGT
TCGAATAGGAGATCACGGACCTAAACAACGGCCGCGACGAGCGTTAAATCGTGGCAGAGT
CTTTGTTAACATTCGCCCACCGCGAGATTCTTGATTGAGCGACGCAACGCTGCTCTCTCT
GACGGTTCTATGGGATCCTCCCTATAGTGAGTCGGNTTACTCAACGTGGTTGGAACGTCT
TCTTTTTCCACGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTCGGCAGAG
GCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTTCC
TTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGTTT
CCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCT
TTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCTTC
TTGTCATTGAGTCGTAGGAGACTCTGTATGAACTGGTTCCCCATCTTTACGGCGAGTTCT
TGTAAGGCCTCTATTTTGAATCCTTGACTCCATGGGAAATTGGGGAACCT
GenBank Accession AL768545 [GenBank]
Graphic View Graphic view of gene At3g16860
Predicted Position of Insertion Chr3:5761965 - go to primer design
BLAST e Value 3e-51
Hit Clone Code (BAC ID) MUH15
Hit Gene Code At3g16860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation COBRA-like protein 8 precursor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37