SimpleSearch - Line and FST details
Line specific information
| Line ID | 077C04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N407324) |
| Segregation Analysis | 50:49:44 |
| Confirmed for Hit | At5g55230 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3520, 3526, 61562 |
Gene hit At5g55230
| Sequence (A. th genome BLAST matches underlined) | >27-K016172-022-077-C04-8409 TGTCCTGTAGATTTCCCGGACTGAAGCCATTTACATTGAAGTATGTCCTGGATCTTCACG CACACACCAATCTCTATATTTCAAATCTCACTGCTTTTTATAGTATTTTCCGGACGACGC GCTATATCACAGTTTTACCTCAGAATTGCGATGCCCTATGGGATCCTCCCTATAGTGAGA TCTTTATGGAAAACTATGGCATTCTCGCGATGATGAGACCTGCAATACCGGTCCTTGTCA TGAAAACGCTGGAGGCACAAGCTAACAACCGACGAGCCAATGAAACACGTAACCGGCGTA TATCTTTGAATGCAAACCAGAATGGAAGCAGGTCTACTGCAAAAGAAGCAGGGAGAAGGG AGACTCTCTACAGGCCGGCTGCTCCTACAAACTACGTTGCCATTTCGAAAGAGGAAGCTG CTTCATCTCCAGTTTCTGGTGCTGCAGATCATCAAGTTCCAGCTTCACCATGATGAATAA AAAAATGAAAAAGATGTGTAATTTTCAGTGTTTGAGTTGGTTTAGGAAGAAAAGGCTCTA TGAAACACCTGAAAGAAGACAAAAAGACATTTGAGAGTAGAATGGTGCACTATGGGA |
| GenBank Accession | AL937135 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22404768 - go to primer design |
| BLAST e Value | 5e-148 |
| Hit Clone Code (BAC ID) | MCO15 |
| Hit Gene Code | At5g55230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | microtubule-associated proteins 65-1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g25225
| Sequence (A. th genome BLAST matches underlined) | >27-K016171-022-077-C04-8409 TGATCCTCGTAGATTTCTCGGAACGAAGCCATTTACACTGAATATTAGTCCCTGTTTACA CGGTGAGTGTATCTTTAATCAGTCTGATTCACTGTTGCTGTATTATGTATTCTAACAGCA TCTGTTCTTGGGTTCTTCATTGTTGACTGTTACAGATTGCTATGGGAGCGCCCCTATAGC GGAGATATGAGAAAGCTAACCTANTTATTTTAAGCGATGAAGTTGATATATCTCAAGTCT TTCACTGCAACGGTTTATTGTTATTCATCAGCATCACCAAAGACAAGACTAGGCTATGGG ATCCTCCCTTATAGTGAGAGGGGACATACCCGTACGATCGAACCCACACATAACTGCCAC ATATTCAATAGGTATAATATATGTATGCTCTCGGATACAACAAGAGCTATGGGATCCTCC CTATAGTGAG |
| GenBank Accession | AL937134 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:9185145 - go to primer design |
| BLAST e Value | 8e-73 |
| Hit Clone Code (BAC ID) | MJL12 |
| Hit Gene Code | At3g25225 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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