SimpleSearch - Line and FST details


Line specific information

 
Line ID 077H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N407387)
Segregation Analysis 50:38:30
Confirmed for Hit At4g21960
Parent of DUPLO pair 2793
Parent of pair(s) none

Gene hit At4g21960

 
Sequence (A. th genome BLAST matches underlined) 
>56-K016171-022-077-H07-8409
GATCATGTAGATTTCCCGGACATGAAGCCATTCACAATTGAATATANTCCTGGGATTAAG
GGTATTTCAGTCAATTTACTCATGCATGAAACACTCTTATGACTAATGAACCACTACTAA
AGCTAACTTTATTGAATCACAAAAGGAGTGTATGCGATCTGAGTTGAACTTTGAAAGTTA
TCCTTATCCGATCTATCACTAGGACTAACACTCAAGACGGGAGAATCCTTGTTTATGCCC
CGGCACAATAGCCTAGCACAAGGTTATTTTGGTCAATAAACTCATGCATGCTTAAACATA
CTAATCAAACTAATTGACTTTACTCTTATGGGATCTGAATTTAGGCGATTGGAATTTAAG
TTTCTTGTTAGATTTTTAAGATCGATACTGAAAGATTTTGACTTTTTTTTTTGGTAAACG
GACAAGGGTATCCTAGAGGGGAAAAAACTGTCGGGGAAAGGTTGGCCCAACTTTTGACCC
TGGAGGGGGACCCTCCTTTAAACCAGGACCTTTGCCCTCTAAGGCTACGGAAGGGTCCTG
GTCTCGATCCCGAACCCAAAGGGGGCCTACTTCGGGACTATCTACCGGGGCACCCCATGG
GGGCTATGAACGCCCCCTTTTGGGGGGGAAACCCCACCCCCGTAACCTCTATATACTCCT
CAAAGCTA
GenBank Accession AL937237 [GenBank]
Graphic View Graphic view of gene At4g21960
Predicted Position of Insertion Chr4:11647395 - go to primer design
BLAST e Value 5e-179
Hit Clone Code (BAC ID) T8O5
Hit Gene Code At4g21960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37