SimpleSearch - Line and FST details


Line specific information

 
Line ID 078G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N407471)
Segregation Analysis 50:7:4
Confirmed for Hit At4g12000
Parent of DUPLO pair none
Parent of pair(s) 83506, 83507

Gene hit At4g12000

 
Sequence (A. th genome BLAST matches underlined) 
>55-K016176-022-078-G07-8409
TGATCTGTAGATTGCCGGACATGAGCCATTTACAATTGATATATCCTTGGATGACCTGCC
GGAGTACGATTTGAAGGAGGAGGCGGGGCAGGCTGGCCCGATCCTATGGGATCTTCCCTA
TAGTGAGACTCTAACTCTAAATTCAGAAACTGTATCTTCTTCGTGCGGATAGGTCATCGA
GTACGAATTTAGAGAGCACTAGGGGATCCTCCCTATAGCGAGGTACGGCTTTGGGTTCCC
AATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTAGGGCAAT
TTGCCCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNTTNNNNNTNNTTTTTGTT
TTTNNTNNNTTTTGATTTTNCNNTNTTCTCATATNTTAGTTTTNTTNTNNTTNTNTTNTT
TTNTNTTTTTTTNNTTTNNNNTTATTTTTTNNAATTTTTTTNTTTTTATAANTATTTATT
ATTTTCCTCTTTTTTTTTTAATTAATATAAAACCCCCCACTCTTCTCCCACNCAATCTAT
CTCTTCTCCCCCTTCCTCAATTCCTCAATACCATATCCTCCCCACTTACCATCCCCCAAC
CCTCCCTCCTAAATAACAAATACTAAACACAATACCACCAA
GenBank Accession FR802311 [GenBank]
Graphic View Graphic view of gene At4g12000
Predicted Position of Insertion Chr4:7194893 - go to primer design
BLAST e Value 1e-06
Hit Clone Code (BAC ID) F16J13
Hit Gene Code At4g12000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SNARE associated Golgi protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR802311 [GenBank]


Last Updated on 10.06.2021 13:37