SimpleSearch - Line and FST details


Line specific information

 
Line ID 079A01
Vector Used pAC161
Line Availability available as T3 set from NASC (N407489)
Segregation Analysis 50:35:34
Confirmed for Hit At1g15670
Parent of DUPLO pair 2665
Parent of pair(s) none

Gene hit At1g15670

 
Sequence (A. th genome BLAST matches underlined) 
>01-011918-strizhov-A1-8409
TTTTGATCCATGGTAGATTTCCCGGACATTGAAGCCTTTACAATGGAATGTATTCTGACA
GTGAGAACCAAAGGCGGGAAACCACAATCTGAACCGCCGATACCCTGTCCTAAAGAAAAG
AAGTGAACTGCCTTATATATACAGAAGGGCTTAGCTAATGATGTTGTTGTCGTGCGCGAT
TCCTTCCGCCACAAGGACATTCACATGAAAACACTAGCTTCAAGCACGTAATGAGACACG
GTTCACTTTGTCCTGCATTCTCCTACGCGCGCGGGGGTACGTCTTTAGCATCCACTGGAG
GACCAAGTATGAGGTACGCTGTGCTACCGTTTATAGCCCTGCACAGTATAACAAGAAGCC
ACCTTACTTATACTCTATTTCAAAACAAAAGCGACCCATTGGAATGACCTGGAACCCGAG
GAAGCTCGCTGATTAAACCGTTACCAAAAAAAACAACCGAGCATCTTTGACACTGTGAGA
GTGATGGTTTGATTACCCGAGACTAGACAATCTAAGCCGTGCTACACCATGCTTGAGACA
GATACAACAAGCTGTAGACTATGCGCAAGAGACTCTGCGGTGAACTGAAAACACCACATA
TGCTGATAGCTCTGCTACGTACTCTATATACATATGTCATTACATGGAAATGGTGGATCC
AGGTAGCGATGNACCTTTTTTNNNGGGTTACAGTTTTCGGAAAGATAGGAAATAGCTCCA
TCTTTTTAGAAAAGTTCAGAATTTGAAGTCTTGATTTAAGAAAAATGAAAATGTTCAGGT
TGAAAGAGATTGAATGAGGTGATGAGAGAAACAGAAGAGTGTGCTACTTTATAGAGG
GenBank Accession FR802314 [GenBank]
Graphic View Graphic view of gene At1g15670
Predicted Position of Insertion Chr1:5390781 - go to primer design
BLAST e Value 2e-30
Hit Clone Code (BAC ID) F7H2
Hit Gene Code At1g15670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Galactose oxidase/kelch repeat superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR802314 [GenBank]


Last Updated on 10.06.2021 13:37