SimpleSearch - Line and FST details


Line specific information

 
Line ID 079B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N407503)
Segregation Analysis 50:49:32
Confirmed for Hit At3g03830
Parent of DUPLO pair none
Parent of pair(s) 10921, 80365, 80412, 80459, 80526, 80562, 80581, 80630, 80658, 80671, 80683, 80710, 80711, 80713, 80714, 80715

Gene hit At3g03830

 
Sequence (A. th genome BLAST matches underlined) 
>18-011888-strizhov-B3-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGACACC
GCAAGAAAACCTTTTGGTGCTTTGCTCGTTCTTGCTAAGGAGCCGCCAAGAATCTTCTTT
GCACTGAAGATACTTCTCACCAAAGCCATTTTCTTGTCTATGGGATCCTCCCTATAGTGA
GTCGTATTACTC
GenBank Accession AL768784 [GenBank]
Graphic View Graphic view of gene At3g03830
Predicted Position of Insertion Chr3:980304 - go to primer design
BLAST e Value 2e-52
Hit Clone Code (BAC ID) F20H23
Hit Gene Code At3g03830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SAUR-like auxin-responsive protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T10I14

 
Sequence (A. th genome BLAST matches underlined) 
>18-011917-strizhov-B3-8409
GTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGACAC
CGCAAGAAAACCTTTTGGTGCTTTGCTCGTTCTTGCTAAGGAGCCGCCAAGAATCTTCTT
TGCACTGAAGATACTTCTCACCAAAGCCATTTTCTTGCCTATGGGATCCTCCGTATAGAG
ANNANANCNCATACTTANGGATTTTACTTCATAACTAATGAAAAATGAATACTTAGAGTT
ATGTTTAATTGTAGATACAACCACCAAGCCACCGACGTACACGCATGCTATACATATTCG
AGATTCCTATGGGA
GenBank Accession AL768785 [GenBank]
Graphic View Graphic view of sequence AL768785 of line 079B03
Predicted Position of Insertion Chr4:11744480 - go to primer design
BLAST e Value 8e-55
Hit Clone Code (BAC ID) T10I14
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37