SimpleSearch - Line and FST details


Line specific information

 
Line ID 079C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N407521)
Segregation Analysis 50:15:5
Confirmed for Hit At1g22550
Parent of DUPLO pair none
Parent of pair(s) 236, 4016, 9888, 11221, 88734, 88737

Gene hit At1g22550

 
Sequence (A. th genome BLAST matches underlined) 
>67-011888-strizhov-C9-8409
TGATCCATGTAGATTTCCNGACATGAAGCACTTTACATTGAATATACATTTTAGAATTTT
ACTAAAATTTGAGGGGATTTTTGTTAAGGGACTATGGGATCCTCACTATAATGAGTCGTT
ATTACTCAAAGCTCCTAAAACAGGAAGTATCGAGGCGGTTCCTGACCATGTGTTCACGTT
CACGGCGGCGGTGGCTGTTGATTGTCCGAGAGGTCCGGTGAGGTAAGTAATTAAGTTGGA
ACCAATCCCAAAGTAAGCAAATCTTTCTCCAACTTCCACACCTAAAAAACCACACCAAAA
AAATAAAATAAAATGTTTAAAAAATAATGGTTTATGAGACAATTTACAAATCACAAAAAC
TGTTCTTTACCTATAATGAACCAGGCGGATATCCATCCGCCGGTGAAAAATTTT
GenBank Accession AL768818 [GenBank]
Graphic View Graphic view of gene At1g22550
Predicted Position of Insertion Chr1:7968117 - go to primer design
BLAST e Value 7e-83
Hit Clone Code (BAC ID) F12K8
Hit Gene Code At1g22550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Major facilitator superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL768820 [GenBank] AL768820 [GenBank] AL768818 [GenBank]


Last Updated on 10.06.2021 13:37