SimpleSearch - Line and FST details


Line specific information

 
Line ID 080C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N407613)
Segregation Analysis 50:45:35
Confirmed for Hit At4g31780
Parent of DUPLO pair none
Parent of pair(s) 3270, 6981

Gene hit At4g31780

 
Sequence (A. th genome BLAST matches underlined) 
>35-K016175-022-080-C05-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGTTCGACCTTCCTT
TGTGAAACCAGTTCGCCCAAAGGTCGGTTTTGGAATCATTCCTAGCTGTTCTTTGTTGCT
TCCGACTCATCCAAATGTAATAGTATCTGTCCGAAAAAATCGCAGGTTGAATTAAGAAGG
GAGCTATGGGATCCTCCCTATAGTGAGAGTCNAACTCCATCTCCNATGAACATCTATAGG
TTTCTCTAAAAACTCTGCGTCTCCCCCCGGTTCCACTCATATCACATGAACATGATCTTC
ATCCGATACGCTTACTCTAGATTTTCATAGCTGACCTTGCTGTGCCCCTGCTATGGGATC
CTCCCTATACTGAGACCATTCTCTTCACTCGATAATCCGACTCCTCCGACGGAGGCAAAG
CTCTCCGGAACCCCTTTATCGCGGGGAAACCTAAAAACGCTATTGAAATCGCTGATAAAC
CTACGGAGACTCAAACCCGCTCTGCTCTTATTGTTGAACCTCCCGGAAGCTA
GenBank Accession AL937410 [GenBank]
Graphic View Graphic view of gene At4g31780
Predicted Position of Insertion Chr4:15375929 - go to primer design
BLAST e Value 3e-75
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation monogalactosyl diacylglycerol synthase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37