SimpleSearch - Line and FST details


Line specific information

 
Line ID 080E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N407638)
Segregation Analysis 50:47:40
Confirmed for Hit At1g02640
Parent of DUPLO pair none
Parent of pair(s) 16, 4772, 4781, 4801, 4957, 89418

Gene hit At1g02640

 
Sequence (A. th genome BLAST matches underlined) 
>45-K016177-022-080-E06-8409
TCGGACGGTTGACTTTGGCCGAGAAANGTGTCNTTGTATGGAACACGTGCGGCGGCGACT
CCACGCCNANTGGGNTCCNCCCNANTNGTGAGANNNNNNNNNNNNNNNCNCGANNAANNA
GTNCAANTCCTTGTCNCTTCCAAAATGGGAATTTCGCNGCTGTAGTAAAGCTCGCGNTGG
NNGGNCCGCGCTTGTTTTCCTTTCTTTCGCCCCCCGTCTCTTTGTTTCTCGCCGCGCGCG
CGCGCGCGCGCGCTGCCCGTTCTTGGATGCCGTCCCATATGCGTCAATGCCGCGGGTGCG
CGGCACACAGAATTCGCCCCCCCGCCGCATTAGCTCGCGCCATATATTTATGATAAGNGG
GATCCACCCATCCATTGATGGTCGGTAATCCGAACCCCGCAGGGGCGTCATCTGCATTCA
CTT
GenBank Accession FR802359 [GenBank]
Graphic View Graphic view of gene At1g02640
Predicted Position of Insertion Chr1:564345 - go to primer design
BLAST e Value 0.006
Hit Clone Code (BAC ID) T14P4
Hit Gene Code At1g02640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-xylosidase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR802359 [GenBank]


Last Updated on 10.06.2021 13:37