SimpleSearch - Line and FST details


Line specific information

 
Line ID 080E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N407639)
Segregation Analysis 50:48:32
Confirmed for Hit At2g46210
Parent of DUPLO pair 966
Parent of pair(s) none

Gene hit At2g46210

 
Sequence (A. th genome BLAST matches underlined) 
>08-K106867-0022-080-E07C-3144
TCCACTATCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACA
GGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGACA
TCTTCGTCTTCGTGAGCTTCGCCGTCACGGCGATTCAACATGTTCAGTTCTGTTTAAACC
ATTTCGCAGCAGATGTGTATACCGGTCCACCAAACGGAAACGATTGGTTTGAGAAACAAA
CCGCCGGTACGCTTGATATATCGTGTAGATCGTTTATGGATTGGTTCTTTGGTGGATTGC
AGTTTCAGTTAGAGCATCATTTGTTTCCTCGGCTTCCTCGTTGTCATCTCCGGACAGTAT
CGCCGGTGGTTAAGGAGCTTTGTAAGAAGCATAATCTACCGTATAGGAGTCTTTCGTGGT
GGGAAGCTAATGTGTGGACGATTAGGACTTTGAAGAACGCGGCGATTCAAGCTAGAGATG
CGACTAATCCTGTGTTGAAGAACTTGCTTTGGGAAGCTGTGAACACGCATGGCTAAAAAG
GTGTTTCGTTTGCACAAGTAC
GenBank Accession HG968707 [GenBank]
Graphic View Graphic view of gene At2g46210
Predicted Position of Insertion Chr2:18978474 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T3F17
Hit Gene Code At2g46210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Fatty acid/sphingolipid desaturase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL937432 [GenBank]


Last Updated on 10.06.2021 13:37