SimpleSearch - Line and FST details


Line specific information

 
Line ID 080F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N407652)
Segregation Analysis 50:49:40
Confirmed for Hit At1g53282
Parent of DUPLO pair none
Parent of pair(s) 12054

Gene hit At1g53282

 
Sequence (A. th genome BLAST matches underlined) 
>62-K016175-022-080-F08-8409
TGTCCTGTTGATTTCCCGGACATGAAGCTTTTCACATTGAATATATGCTGCTATTAACTG
AAATTTACATGCCAGATATGGGATGCTCCCGATAGTGATGACAAATGAATATATCCTGCT
ACTAACCGAAGATTTACTTGCCAGTTGATGTGATCCTCCCGATAATAAAAATATTTTGTA
TAAAGAAATTGACATGATTTATATAAAAAAATTGCAGGATGGAGACTATAGAAATGAGAA
ACATAAATGGGTATATAAGTTGACAAAATAGTCGAGATATTTGTAAGATTGATGAAGTTT
TCATATCAATAAAAATATTTTTTAAATTATAAAACTTTTTTTTATACCAATTATAATTGT
ATCAAAGATTAAAAGAAGATAGAAGAGTGAAAACCAACATTTTTGGTTTACTTTTGCAGT
ATTATAAATTATCGGACTCAAAATGTTCATCAATACAAAGCAACATCTCATCAATGCAAA
TCTGCACTTTGCATAATTTTCAACATGCAAATCTCATCTACTCCACTCGGAAACCTTCCT
TAATTGGGTTCACAACTTCATAAGTTCACATCATAGATCTGTGTTATTGGGCTGCTTTAT
GGCTTGTAAAATTGGGCTATGGGATC
GenBank Accession AL937444 [GenBank]
Graphic View Graphic view of gene At1g53282
Predicted Position of Insertion Chr1:19868199 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F12M16
Hit Gene Code At1g53282 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant thionin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37