SimpleSearch - Line and FST details
Line specific information
| Line ID | 081A09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N407689) |
| Segregation Analysis | 100:98:93 |
| Confirmed for Hit | At4g37340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6245, 7770, 10542, 10564, 10565, 11417, 93719, 93730, 93760, 93767, 93774, 93781, 93788, 93793, 93794, 93795 |
Gene hit At4g37340
| Sequence (A. th genome BLAST matches underlined) | >65-K016179-022-081-A09-8409 TGTCCTGTAGTTTCCCGGACTGAAGCCATTTACAATTGAATATACTCATTTTTAATATTT ACATGTAGCATTATAAATTTTGCAGGAATTTACAAAGGCTGAGATGAAATCAATGTTTTC TAACTCTAACATTCAACAAGCATTATAAGAGTGTTGGCTGGAAAATGTTACTACGGAGAT GGTGCAGAGGATGACCCGGAGGCTAAACGCGTGCGGGAGCTTATAGCAGAGGGAATGGGG TGTTTTGGTGCTGGAAACACTGCTGATTATTTACCGATCCTGACTTGGATCACAGGTTCC GACAAACGGATAAAGAAGATCGCTATGGGATCTCCCCAATAAAGGGAGAACAAGTCCTCT ATGGGATC |
| GenBank Accession | AL937478 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:17566081 - go to primer design |
| BLAST e Value | 1e-121 |
| Hit Clone Code (BAC ID) | AP22 |
| Hit Gene Code | At4g37340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 81, subfamily D, polypeptide 3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T12H1
| Sequence (A. th genome BLAST matches underlined) | >65-K016180-022-081-A09-8409 TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGCAATTGACCATC ATATGTTAAATATTTGCTACAATTCACTGAAATTCACCTATAAGCAGAGATTGACTATGG GATCCTCCCTATAGTGAGATCTTACAGCGTTGATAATAAATGTGTTGGTGATATAAAATA TGATGATTGATCTCTCTTTTCCTCCATCGTATACTTTTACTTTTGTCACCCTCATGTTCC AGCGTCCTCAGTAACTTGATTTTCTTTCATTAAACACACATACATATATACACACATTCA CAATATTTAAATGCAGGGTTGTTATATATGTTACAAAAGAGTAACAAGTCCCCTATGGGA TCCTCCCNTATAGTGAGATGGGTGCCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL937479 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1483151 - go to primer design |
| BLAST e Value | 5e-77 |
| Hit Clone Code (BAC ID) | T12H1 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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