SimpleSearch - Line and FST details


Line specific information

 
Line ID 083F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N407944)
Segregation Analysis 50:26:17
Confirmed for Hit At2g24230
Parent of DUPLO pair 7989
Parent of pair(s) none

Gene hit At2g24230

 
Sequence (A. th genome BLAST matches underlined) 
>94-011869-strizhov-F12-35St
CTGACGTAAGGGATGACGCCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCATTTGAATATT
AATCAATTGCTGATTAAGTCCTCCAGTGACTGATCTTTTTCTCTTGAAAAGTGCTGGGTT
TGCAGCGATAGGGCAGCTATTTGTAGAACCAAAGAAGGATCTGTTCAGAGTTTCAGCTGA
GAACTTTCCGGAACAAAATGTTAAGTTGTTGAAAGAGAAGTTGAATCTCTCCATCCAAGG
GAGCTTCTCAAGGATAGACATCGGTATCTCTCCCGTCAAATTGTTCCTCGACACATCGAT
AGCCACAAGGTTCTTGATACTCAAAATCGGGATATGTCCTGCAAGATGGTTTCCAGAAAC
ATCGAGTGTACTCAAATCACTCAGCTTTGAGATCTCTCTATGGGATCCTCCCTATAGTGA
GTCGTATTACTCAANGNNNGGGNNNNNNGGNNGGGGCCGNGCGNGTTTTCCGGGGGCCCC
CCCGGGGGGGCGCCCCTTGGGGGGCTCTCTCGGGAGGATCCATAGAGAGATCTCAAACTG
AGTGATTTGAGTCCACTCATGTTTTGGAAACCATCTGCAGAAATATCCGATTTTGAGTGA
TAACACCTTGTGGGTATCCATGTGTCCAGGAACAATTTGACGGGAAGAGATACCGAT
GenBank Accession AL769114 [GenBank]
Graphic View Graphic view of gene At2g24230
Predicted Position of Insertion Chr2:10303177 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F27D4
Hit Gene Code At2g24230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL769114 [GenBank]


Last Updated on 10.06.2021 13:37