SimpleSearch - Line and FST details


Line specific information

 
Line ID 084C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N407997)
Segregation Analysis 50:46:37
Confirmed for Hit At1g54020
Parent of DUPLO pair none
Parent of pair(s) 2778, 97350, 97352

Gene hit At1g54020

 
Sequence (A. th genome BLAST matches underlined) 
>35-011871-strizhov-C5-8409
NTGATCCATGTAGAATTTCCCGGACATGAGAGCATTTACAATTGAATACTATGGTATCCT
ACGGATAAACACGCTTGATCAATAAGCCCGGTTGAGAGGAACTATTTATTTCCGACGGGG
ATAGATCATTGTACGAGAGGGACTTCACCGACGAATGCACTATTGAGTCCCTGCCTATGG
TGACGAGGTATATACATAAGAGAGGAAATACCAGTAGTTTTCCTATGGGACCCTCCGTAA
AAGGAGTGCCACAACTCAGCAGTCCAAAATTATACTTAGGCCAGTAAGGGACGGCATAAG
GATCCCGCCTAAAAAGAGGCACTTGCACTCGGGTACTTCAATATTGCAAACTCTTTTATA
ATGTGTGAAAAGTTGGCAAAAACGTAACGGGCTATGGGATCCTCCCTATAGAGAGTCGTA
TCACTCANCTTCTGGAAACGACATGGGGCACAAGTCCTAACCTCCCAACCAGGCTGCCGC
CTGGCCCT
GenBank Accession AL769164 [GenBank]
Graphic View Graphic view of gene At1g54020
Predicted Position of Insertion Chr1:20163491 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) F15I1
Hit Gene Code At1g54020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-like Lipase/Acylhydrolase superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37