SimpleSearch - Line and FST details


Line specific information

 
Line ID 085A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N408070)
Segregation Analysis 100:77:38
Confirmed for Hit At5g66700
Parent of DUPLO pair none
Parent of pair(s) 3063, 8083

Gene hit At5g66700

 
Sequence (A. th genome BLAST matches underlined) 
>41-011845-strizhov-A6-8409
TTGATCCATGGTAGATTTCCCGGCACTGAAGCCATTTACAATTGAATATATCCTAATATA
ATAAAGTGGGATATTTCGTCATCTCACATGTGGTGGGATATTTGTAAAATTCGATTCAAC
TACATTTCACATATGTGTAATAAATACTCAAAATATACTAATTGACGAATAAACTATATG
TTAATTATCTAAGAACGGATAAAATTACTCATCTTTCGAAAAAACAAGCAACATGAAATT
AAGAATCACCAAATTTACTCTGTTTTATAGTGAAAAAACATAAAATTTATACCTGAGACT
CGAGTTGGCATTGGCCGAGTACGACGTTGTCGTGGTGGTTTTTGAGTTTGGCGTACTCTT
CCTCTATGGGATCCTCCCTATAGTGAGCGTATTA
GenBank Accession AL769229 [GenBank]
Graphic View Graphic view of gene At5g66700
Predicted Position of Insertion Chr5:26635095 - go to primer design
BLAST e Value 6e-148
Hit Clone Code (BAC ID) MSN2
Hit Gene Code At5g66700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation homeobox 53
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL769230 [GenBank]


Last Updated on 10.06.2021 13:37