SimpleSearch - Line and FST details
Line specific information
Line ID | 085B06 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N408082) |
Segregation Analysis | 50:39:22 |
Confirmed for Hit | At4g17490 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g17490
Sequence (A. th genome BLAST matches underlined) | >42-011848-strizhov-B6-35St ATGACGTAAGGGATGACNGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT TCGGTTTAAACTATCAGTGTTTGACAGGATATATTGGAGGGTGAACCTAAGAGAAAAGAT CGTTTATTAGAATAAGGGGATCTTTAATAGGGCGTGAAAGAGGTTTATCCGTTCGTGCAT TTGTATGTGCATGCCAACCACAGGGTTCCCCTAGGGAGTGCTTGGCATTCCGTGCGATAA TGACTTCTGTTCAACCACCCAAACGTGGGAAAGCCTGACGACGGATCATCATTCCAAAAA GATCCCTTGGCTCGTCTGGGTCGGCTAGGAGATCCCGTGAATTCAGAGATTCATGTTTAT CAAAAGATGAATACGGTGTAGTACTAGGTATAATAAAGATCTCTTGCGTGTCAATATGGG ACTAATTTACTACTCGTTGCGAGAATACTTCGCATGCATGCATATGCGATATCAAAATGA AGCGGCCGTATCAACTCAATGTTTGAATAAACACACGTTCTTATATAAAAACTTATGATA GTTGCAAAACTTGATGGAGGAAAACACTGGTTTTACTTCACGTACAGTCGATGTCATTTT TGTCTTTGGATAACAATATTTTAGTTTTGAAAACTAG |
GenBank Accession | FR802483 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:9754174 - go to primer design |
BLAST e Value | 1e-71 |
Hit Clone Code (BAC ID) | FCAALL |
Hit Gene Code | At4g17490 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | ethylene responsive element binding factor 6 |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | AL769254 [GenBank] |
Last Updated on 10.06.2021 13:37 |