SimpleSearch - Line and FST details


Line specific information

 
Line ID 085D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N408109)
Segregation Analysis 101:86:64
Confirmed for Hit At5g14750
Parent of DUPLO pair none
Parent of pair(s) 3300, 3342

Gene hit At5g14750

 
Sequence (A. th genome BLAST matches underlined) 
>68-011850-strizhov-D9-35St
CTGGCGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGCCCCCCACATCG
GGTTCCATGATGACCACTTTTAAAGTACTGCTATGGGGCGCGGTGTTATCCCGTATTGAC
GCCAGGCAAGAGCATCTCGGTCGCCGCATACACTATTCTCAGAAATGACTTGGTTGCGTA
CTCACCATTGACATAAAAGCATCTTACGGATGGCGTGACAGAAATAGAATTATGCAGCGC
TGCCATAACACATGAGTGATTACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGAC
CACAACGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGG
TGAGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
ACAATGGCAACAACGTTGCGCAAACTATTAACTGGCGACCTACTTACTCTATGGGATCCT
ACCTATACTGATTTTGAGCAAATGAAGTTATCCCTATTACCAAGCAACTTGTGGAGCCTA
ATGATCAGATCCTCTTCTTGGCTCGAGAAATTGGCTCTTTTCACATTACGGCTGAGATAA
TCATCCACCTCAATCTACAACCCTTTTCACATTTTTTTAAACCTACCCACATATCCAATT
ATTTAACTGAGGACCCTTATTCATAAAAATAAAACCACAAAAAGGTGACCCTAG
GenBank Accession FR802508 [GenBank]
Graphic View Graphic view of gene At5g14750
Predicted Position of Insertion Chr5:4763782 - go to primer design
BLAST e Value 8e-61
Hit Clone Code (BAC ID) T9L3
Hit Gene Code At5g14750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 66
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL769305 [GenBank] FR802508 [GenBank]


Last Updated on 10.06.2021 13:37