SimpleSearch - Line and FST details


Line specific information

 
Line ID 085H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N408150)
Segregation Analysis 50:17:10
Confirmed for Hit At1g30990
Parent of DUPLO pair none
Parent of pair(s) 5943, 10517, 11010, 11019, 11020, 75781, 75785, 75788, 75790, 75797, 75801

Gene hit At1g30990

 
Sequence (A. th genome BLAST matches underlined) 
>16-011845-strizhov-H2-8409
TTGATCCATGTAGAATTTCCCGGACATGAANGCATTTACAATCTTAAGGTGTAATATCAG
GCGGGGGCTATCTCTGTTCTCTCCTTAAACTCTTCCTCCTTCCCATCTTCATATATAATG
AATGATGACCAAACACATTCATTTCTTACTATACTAAATAAACCCTACTTTTTCCATATT
AAAACAAATCATTTGTAATGTGGATACCATGAATGCACCGCACTGACTATGGGATCCTCC
CTATAGGGAGTCGATCTACTGAAGCAGCCGACGCACCGGACAGGCGCGCAACACGATCGC
AAAGTATTTGAACGCAGGTACAATCGAGCCGACGTTCACGGAACCGGCCCCCCCCTTGAG
GTCGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAAGGCAGCCGTC
TTCTGACAACGACATGTCGCACAAGTCCTAAGTTACGCGACAGGCTGCCGCCCTGCCCTT
TTCCTGGGCGTATACTGGCGCGTGTTGCACCCGCATAAAGGAGAATACTTGCGACTA
GenBank Accession AL769396 [GenBank]
Graphic View Graphic view of gene At1g30990
Predicted Position of Insertion Chr1:11052839 - go to primer design
BLAST e Value 4e-84
Hit Clone Code (BAC ID) F17F8
Hit Gene Code At1g30990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Polyketide cyclase/dehydrase and lipid transport superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37