SimpleSearch - Line and FST details


Line specific information

 
Line ID 085H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N408158)
Segregation Analysis 50:22:17
Confirmed for Hit At1g13245
Parent of DUPLO pair none
Parent of pair(s) 70822, 70827, 70835, 70836

Gene hit At1g13245

 
Sequence (A. th genome BLAST matches underlined) 
>80-011847-strizhov-H10-35St
CTGACGTAAGGGATGACGCACCAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGGCGCTCCCCGCCT
TCGTTTAAACTATCATTGTTTGAATGGGGATAGAATTGGGCACATACGAATCTAATGCTT
CTTATATTATGGATTCAAAGATGTATTGGAGGATTAAAGAGAATGATGATTCTACTATGA
AGATACTCCTTTTTATAAAGGGAGATAAATATTGAAACGCGGCCCTACACACTCCTTATT
CACTACCGACTTGCGTGTTTTTTGCGTGATTGCAATCTATTATCATTGAATATTGAATGA
TTTATATGGTCACAATTTCACAAAACCCCCCAAACATCTATGCCCTATTTGTCCCCGTTG
TTGGTATGTATCATGGCACACATGCACGCCACGTGGTTGATTTATTTTAATTTTTTGGTT
GTAATTCTAATTTATTTTTTATCTATAAGAAGTTGCAAGTCTCTCATTACTACGAGGATT
TTCCAAACAGACGAAACTGGGTTGTCTTCTTCCACCTATAGATGTTATATTGCTTCTAGA
GATATGAGTCTAGGGACCCTACTACACCTACTGTAAATGCCATCTGCTCTTACCACGATC
AGGATCGTGAAGTTGGACCGGTCCTTGGACCTGCTGAAAAAGAT
GenBank Accession AL769416 [GenBank]
Graphic View Graphic view of gene At1g13245
Predicted Position of Insertion Chr1:4525997 - go to primer design
BLAST e Value 3e-100
Hit Clone Code (BAC ID) F3F19
Hit Gene Code At1g13245 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ROTUNDIFOLIA like 17
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR802543 [GenBank] AL769416 [GenBank]


Last Updated on 10.06.2021 13:37