SimpleSearch - Line and FST details
Line specific information
| Line ID | 086D06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408202) |
| Segregation Analysis | 50:43:34 |
| Confirmed for Hit | At1g17150 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4173, 4225, 7278, 81794, 81813, 81818, 81823, 81827, 81830, 81832 |
Gene hit At1g17150
| Sequence (A. th genome BLAST matches underlined) | >42-K011905-0022-086-D06-8409 GTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAACAG GGAATCGTAAACACGCTTGTATGATGACATTGCACCAGACGGAATATATCTTATCGCACT ATCAGAATCTTTTATATACTGATAACGATTCACTTATTTTTTGTACACACACACACATAA ATGAATACGCTCTTCAAATAACTAAATAAAAAATATGTAGTTAAATTGAACTATGGGATC CTCCCTATAGGGAGTCGTATTACTAAANNNNNNGNNGNNGANNCCATTNACCNTTTATTA ATTACATGAAAGGTACTTTTCCCCACCGCTCCTACATAACTGCCCAAAAGGGGGTATTAC AAAAGAAATATAAAATACTGTGGATAGGTAGGCGACTCCCTAACCCTCTCTATCGCAGGA TCCGAAATTTTTATTCACCTCGTGTCTAGATCATAGCTTCAGGAGGGGGCGTTAAATATA GATAACCCTGGAATAATCTCATGCGTAAATAGGCTCATGTCCCGGCATTCTCACTTTTGT AACGAATCACCATCAGGGGTATTACTGGGTGATTAGGGAAAGAGATGTATTCTTGGTGAG CCACGCGCAATGCGACAGGGCGCGGGGGTCATCCAAAAAGCACAACCAATTTCGGCTAAA AAAAAAATTCAATCAGCAAAAATTATTCTCCCTAGGAGTAAAGGTATTACTGTGGGTTCT GTAGTCTTCAGACAGGAAATTTTCCATGCGCCCATAGGTCGGGGGCGGAGAAAAATAAAT GTACAAATGAAACCTTGTATATTCGCCTCTACTCGGAGAACAAATCAAAAAGAACACCAC ACATTTTTCTACAAAAAGAAAGAGAAAGA |
| GenBank Accession | FR802589 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:5866211 - go to primer design |
| BLAST e Value | 8e-21 |
| Hit Clone Code (BAC ID) | F20D23 |
| Hit Gene Code | At1g17150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Pectin lyase-like superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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