SimpleSearch - Line and FST details


Line specific information

 
Line ID 086E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N408212)
Segregation Analysis 50:41:35
Confirmed for Hit At3g03540
Parent of DUPLO pair none
Parent of pair(s) 91368, 91369, 91370, 91371, 91372

Gene hit At3g03540

 
Sequence (A. th genome BLAST matches underlined) 
>52-K011905-0022-086-E04-8409
GTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGGAAAT
TACGTTGACCCGAATCCAGGTCACTCCATTCGGGATATTTACGAACAAGTGTTCGGTAAA
CCATGGGATTCGGGTCACCCGGACCCAAACCCGGGTCCAGCTACAATGTCCGGATTTGCC
CAAAACGCCGAGCGAAAGATGAAAGGGATGTCTTCTGCGGTTATGAACGGATTTAAACCG
GACGCTTTGCCGGTTTACAAGGAATTGGTTCAAAATTTCGCTATATGTGATAGGTGAGAC
CGTTTGACCTGTATAAATTACATCTGTATAACGGTTCGGTTCATCCAACTAAAACCGAAT
TGGAAATTGGTTGTCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAANNNNNNNTT
ATAAGCNTCATATGCTTATTAGTTATGGATATTTTTCGTTCTCTCACATTTTGAGTCTAT
ACAAATCTGGACAATTGAAGACTACCTCATCAAATCCCTTATAAATACTTAACATTTTAC
CCCCAAAATTTACTATAAATACATTTGTACTGAAAACTATTTCCCACATTTTTGAACTTT
GGAACCATTTTTCTTGGGCTTTTCTAAGGGGGAACCCCACATTATTTTTCCCTTTTTAGC
CTAAGGGAAATTACCCATATTTTTGGCTTTGGCTGGATAAAAAAAATAAATTGGCTAGAA
TGTTTTTTTCAAGGACCCAGGTTTATTGGAGCCCCCAAAATTGAATTTTTTGATTTTGG
GenBank Accession FR802599 [GenBank]
Graphic View Graphic view of gene At3g03540
Predicted Position of Insertion Chr3:848089 - go to primer design
BLAST e Value 6e-179
Hit Clone Code (BAC ID) T12J13
Hit Gene Code At3g03540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation non-specific phospholipase C5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37