SimpleSearch - Line and FST details
Line specific information
| Line ID | 087B12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408280) |
| Segregation Analysis | 151:148:136 |
| Confirmed for Hit | At1g76710 At3g25840 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g76710
| Sequence (A. th genome BLAST matches underlined) | >90-K012440-022-087-B12-8409 TTTGATCCATGTAGACTGTCCTGTACTTGTAGCTACTTACCATCGATTTGTTCCTATATT ATGTTTGGATTGTGGGATCCGAGCGTGTGGATTTGGGTTGGACTGATTGTTTACTATTCA AACAGTATTTACGCCTGAATAATGATAAAGCTTCTGGTCTTTTGAGAGTTCTCTTTAGAT AACCTGAGTGTGGCACTATGGGATCCTCCCTATATAGAGTCGTATCACTCACCTATGGTT CTTGCCATGATGTTACTTCGCCACAGTACTCCATTATAAATTGCCCGGCCGAAATCATAG CATGAAATACAACCAGTCATTTACTAAAACCCATATGACTATTTACTTAAGAAAAAGAAT ACACCACCCATGTTATTTGCCCATTTACATTAGATCAACGAAGTGTGACGGAAATTGTCA TAAATCTTGGTAAAGAGTATCACACATGATAAAGACACAGGAATAAATTTTGAGGCCTCA CCTTTATCTCTTCAAGAGCCACTATGGGATCCTCCCTATAGTGAGTCGCATTACTCACGA CCTCGCACATACAGGGTGATCATTATTATTTCTTTAACAACAGGATAACCCATTTTTGCC TATATAAAAAAAAAAGGGCTTCGGGACATCGGGTATACAAAACCATTTTGAGATATGAC |
| GenBank Accession | AL769538 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:28791287 - go to primer design |
| BLAST e Value | 9e-113 |
| Hit Clone Code (BAC ID) | F28O16 |
| Hit Gene Code | At1g76710 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SET domain group 26 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g25840
| Sequence (A. th genome BLAST matches underlined) | >90-K012260-022-087-B12-8409 TTGGGTTGGATTGATTCTTTACTATTCATACAGTATTTACGCCTGAGTAATGATAAAGCT TCGGTCTTTTGAGAGTTCTCTTTAGATAACCTGAGTGTTGCACTATGGGATCCTCCCTAT ATAGAGTCGGATTACTCAGCTATGCATCTTGGCAGTGGGCTACTCCTGTCTTGTTCACGC TTGTGAAGACCACGCTCGAGATCATAGCATGAATTACTAGCGGCCTTTGACTACAACCCA GATGGGTATTTACTGAAGAGAAGGAATACACCTCTGCTGTCATTCGCCCATTTACATTAT ATCAGCGATCTGAGACGGGAGATTGGCTAAATATTGGTTGGGATGTATTCGCGTGCAGAA GACACAGGAACATCTTTTGAGAGGCTATCCTTTGTCTTTTGGCGAACCACTATGGGATCC TTCATATAATGAAACGCATCACTAATGAATTAGATCATACAGGTTGATCATTATTATTTC TTTAACAAAAGATTAAAACATTTTTACATATCTAGATAAAAAAGGGTTTGTGAAATTGGT ATAAAAAACAATTTTGAGATATGACTCCATATTAC |
| GenBank Accession | BX649692 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr3:9457122 - go to primer design |
| BLAST e Value | 7e-58 |
| Hit Clone Code (BAC ID) | K9I22 |
| Hit Gene Code | At3g25840 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Protein kinase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
