SimpleSearch - Line and FST details


Line specific information

 
Line ID 087F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N408328)
Segregation Analysis 50:44:40
Confirmed for Hit At1g20960
Parent of DUPLO pair none
Parent of pair(s) 12020

Gene hit At1g20960

 
Sequence (A. th genome BLAST matches underlined) 
>94-K012260-022-087-F12-8409
CTGATCCATGTAGACTTTCCCGTACATCGAAGCCTTGGCTGCACAGACTAACATATTAAA
GGTCATTATATTGTAGCACAATCAGCATATATCGACATATGTTTCGAGCACCTAACACCA
GATAACGTACCTGGACGCGTCCATGAAGAGTCAAATCGGCTATATAATCTACATAGTATG
GGCATAGGCGGAAGGGAGACAGAACTACCATGTAATACGCCTTAGCTACGAAATACTCCC
TATAGTGAGGCGTATGACGCAGAACCGTTTTAAAGTTGTGTGGTGCACTCGTTTGGCTAT
GGGATCCTCCCTATAGTGAGTCGACTTACTCAAACCGCGTGTCAATCGCCTACTTTTTAT
CAGGGTTTCTAATTGCAGTAATTCAAGATAACAGTCAACATTGAAATCGCTGCACCACTA
ACAATACTAGGAGGTAGCCCACCCAACTGCTTCTGGATTAGACCAATGAAGGCTTCATAA
GCAGGCTTCGGGAACTTAACCTTCGGGTGATCTGCCGGATGATCACTATCAGTACACCGC
ACTCTCTTGACTAAGACGCCCCCTATTACTCTGCCTAATATTGACCATATAATCAACAAC
ATCACGTTGGTTCTTTTTAAACTTTTT
GenBank Accession AL769594 [GenBank]
Graphic View Graphic view of gene At1g20960
Predicted Position of Insertion Chr1:7309134 - go to primer design
BLAST e Value 8e-33
Hit Clone Code (BAC ID) F9H16
Hit Gene Code At1g20960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation U5 small nuclear ribonucleoprotein helicase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL769594 [GenBank]


Last Updated on 10.06.2021 13:37