SimpleSearch - Line and FST details


Line specific information

 
Line ID 088E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N408404)
Segregation Analysis 50:40:27
Confirmed for Hit At5g36950
Parent of DUPLO pair none
Parent of pair(s) 4277, 4281

Gene hit At5g36950

 
Sequence (A. th genome BLAST matches underlined) 
>29-K016185-022-088-E04-8409
TTGCTTCACATGTGGTTTTGGTGATTTTTACATCGAATTCTTCGGTTTGGCGATGATTCA
TGATTTGTGATTTCTGCAAGGAAGATGTATAACCATTGCACGTGCCTTGGCTGATCACTC
CCTTGCGTAAGTTACAAAGCATGGATCGTCAATAAACACACAAAGCCAATACTTCAAGCG
GCCGGTCTTGACTGTGATTTGGTTATATTGAGAAGATGATAGGGAAATGTTTCGGGAAGG
TTTCAATGCTTTGAAGCTATGGGACCCCCCCTATCCTTAGGAGGCCTTCTCGGTAAAACC
TTATCCTCAAGCTATCACCTTCACCCGTGACTACGTTCTAGGCGCGTCACTAAACCTCAT
CGGGCAATGCGGTACACTCTCTCTATTGAGACTTACAAAGGGCCTCCTTGAAGGAATGGA
TCTTTGGCACCTAAGGGACCTCTCCTAAATGGAGATAAAAACTATCCCCCGGTTGGTCTT
TAAGTCCCAAAATGTACGCGACCACCCCGCAAACTCCAGAAAAAACCCAAGCTGTGATAT
TCCAGTTGCTTCCTCAGGCTAGAGTATAAGCTGTTCTAAAAAAACATCCACGAAGGTCAA
AGGGCTTTGATGCCCATTGTAGCATGACTCCAATCTCTGGCCTCCCCATTCCTCCGAAGC
ACTGAAAAACCGTACCCCGTCAGGTATACCGGCAAAAATAAAAT
GenBank Accession AL937684 [GenBank]
Graphic View Graphic view of gene At5g36950
Predicted Position of Insertion Chr5:14595441 - go to primer design
BLAST e Value 2e-27
Hit Clone Code (BAC ID) MLF18
Hit Gene Code At5g36950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DegP protease 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37