SimpleSearch - Line and FST details
Line specific information
| Line ID | 088H07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408443) |
| Segregation Analysis | 100:95:66 |
| Confirmed for Hit | At5g62165 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4514, 4517, 4612, 10049, 10063 |
Gene hit At5g62165
| Sequence (A. th genome BLAST matches underlined) | >56-K016184-022-088-H07-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAACCATTTACATTTTTGTGGCTT GCTTCTTGTTTCAATTGCTACAATACGCCCACAAAATAAAATCATAGGATGCAAAAGAAG TAAAACAGATCAGTATGTAATCTTTGTGACCATCGATCCATCAGTTGTTTTGTGATGTAG TAATTGATCTCATAAGATTTGGTTTTGTTGGCCATTGAAAGTCAAAGAATCAATTATTAG GGACAATGTCCCACATCGGAAGTTGAGTAGGATCTTAAGTGGTATATATAAGATATGGGT CTCTCCACCTATTGCCAATTGGTTTTAAGTTGGAAGCCCACAGTCTAATATCAATAGCAT GGAAATCATGTAAAGTTTAAGTTTGATTATTTTTACCAAGGATAAAACCGTGAAAGTCAT CAAGTGAAAAAAAAAGAGTTTGCTAACAAACCTGCAAGTGAATTTGTGAGTCGTGATTGC TGGTTTCATGATCTTTTGTGTACTTGCGGTAGCGTTCGATCGTCTTCTGCATACTGATGA TCAAAAATAGACATATATTTTCAGAAATATGAACTAACGTACTTATCTTCGNATTTGTTT TATCTATAGCTCTACTATATTTGAAATAACATCTTATCGCAACGAGATATGAAAATTTTG TTTGACTGTAGTATGATTCTTAGATTGTACTACAATATCTTCTTTGCTGTTGGTAAATCT CT |
| GenBank Accession | AL937748 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:24966842 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MTG10 |
| Hit Gene Code | At5g62165 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | AGAMOUS-like 42 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T32F12
| Sequence (A. th genome BLAST matches underlined) | >56-K016185-022-088-H07-8409 CATTTAGAAGTTAAAACGATAGAAAATAAGAGAAATAAAAACTACTAAATTTATCTATGA AATAAATTAAAATTCTTTCAATAAAATAGATAAAACTGGTTATTTCGTCAGGTTTGGGAT CATTCGAAACTAATTTAAAATTGTTCGTTTCAGAACAAGATATCATGTATATACGTAGTC CAAATCACGGTTTTTAGCTCCGAATGTAGGTATAGGTGAGGCTTTTACTCTGACACTTTC TTGTAATTCCGACCAAAAACTACACCTATGGGATCCCGCCTTATAGTGAGGAGNNAACAN GAAAGAGTTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCGGCG |
| GenBank Accession | AL937749 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:14887918 - go to primer design |
| BLAST e Value | 3e-88 |
| Hit Clone Code (BAC ID) | T32F12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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