SimpleSearch - Line and FST details
Line specific information
| Line ID | 089B08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N408468) |
| Segregation Analysis | 50:49:37 |
| Confirmed for Hit | At4g23670 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5961, 7709, 7716, 7737, 10477, 75779, 75780, 75781, 75782, 75783, 75784 |
| Note |
Gene hit At4g23670
| Sequence (A. th genome BLAST matches underlined) | >58-K016186-022-089-B08-8409 TGATATGTAGATTTCCCGGACATGAAGCCATTTACAATTGGCGTCAGCGAAGACATGGTT CTCGCTCTTCCAGCTCTTGTAGTGTTTCTCCGCCGATCCTTTCAACGGAACCTCCGTCAC GTACGTTCCCGATGTCGCCATTTCTTTCTCTCTCTCTCGTTTTAAAGTTTCTACTTGTTT TCTGATTGATTATACTGAATACTTGTCGTCGCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL937782 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12333554 - go to primer design |
| BLAST e Value | 2e-73 |
| Hit Clone Code (BAC ID) | F9D16 |
| Hit Gene Code | At4g23670 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g18670
| Sequence (A. th genome BLAST matches underlined) | >58-K016187-022-089-B08-8409 TATCATGAAATTTCCCGGAATGAAGCCATTTACATTGGCGTCTGCGAAGACATGGTTCTC GCTCTTCCAGCTCTTGTAGTGTTTCTCCGCCGATCCTTTCAACGGAACCTCCGTCACGTA CGTTCCCGATGTCGCCATTTCTTTCTCTCTCTCTCGTTTTAAAGTTTCTACTTGTTTTCT GATTGATTATACTGAATACTTGTCGTCACTATGGGATCCTCCCTATAGTGAGAAACTCAA ACTTTAATATTAGAATAACCAGTGGTGTTCCACGAAACTCACTATGCCTATGGGATCCTC GCTATAGTGAGAGNATATCNAGGAAATGATGAGGCATTATCCTGATATCATATGGTCCAA AAATAGTAGTGGACTTAACATCTTCTTCTACGCGGTAAGCCAGAGACGAGAAAAGATCTT TAGCCTCATTTACAATATACGTGCTAAGAAGAACATCCTCGCTACAAATTGGGACATATT CCATAACAATATGCTTCATCACGCCGCGTATAGAGCCCCAGTCTCAAGGCTTAATCTCAT TGCTGGTGAAGCTCTACAGATCGCAAGGGAACATAAATGGTTTAAGGTGATACAAAATTG TATATATGATCTTGGCTACAAAGGAAATAGGCAAAAACTGTTTCTGTGAAAAGGAACCTA TGGGATCCTCCCTATAAGGGGGAGAACACAAGAAAGAAGTCCCGAACCGTGGGGCCCCAA AAAGAAATACGAAGGCCCAACAACACAAGATAAACCCCCTAAAAACACGCAAAAAGGAAA AGGAAATGA |
| GenBank Accession | AL937783 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:6425377 - go to primer design |
| BLAST e Value | 2e-141 |
| Hit Clone Code (BAC ID) | MVE11 |
| Hit Gene Code | At3g18670 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ankyrin repeat family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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