SimpleSearch - Line and FST details


Line specific information

 
Line ID 089D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N408495)
Segregation Analysis 50:48:37
Confirmed for Hit At1g58390
Parent of DUPLO pair none
Parent of pair(s) 9761, 9771, 9777, 85200, 85211, 85221, 85230, 85238, 85245, 85251, 85256, 85263

Gene hit At1g58390

 
Sequence (A. th genome BLAST matches underlined) 
>84-K016187-022-089-D11-8409
GATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGCTATGGGATCCT
CCCTGTAGTGAGGAGAAATGTTGTCGAAGAAATAAAGGAAATTGTTTACGACGCAGAAGA
TATAATTGAAACATATCTTCTTAAAGAAAAACTTTGGAAAACAAGTGGAATCAAGATGCG
TATCAGAAGACATGCTTGCATTATTTCAGATCGTAGGAGAAATGCATTAGATGTTGGAGG
CATACGTACGAGGATCTCGGATGTGATCCGAGATATGCAGAGTTTTGGAGTGCAACAAGC
TATCGTTGATGGTGGTTATATGCAACCTCAAGGTGATAGACAAAGGGAGATGCGACAAAC
GTTTTCTAAGGACTACGAAAGCGATTTTGTGGGGTTGGAGGTAAATGTTAAGAAACTGGT
TGGATATTTGGTGGACGAAGAAAACGTTCAAGTGGTTTCCATAACCGGGATGGGTGGCCT
ATGGGATCTCCCTATTAGTGGAGANNNNNNNNANCCNNGNNNGNTGNTNNTTTTTTTTTT
TAATAGACTAGTGTGGATGTCCGCCTCCGCAAGAATATAACTCGGAAGAATGTATGGCCA
ATGATCTTGCAGAATCTAACCTCTAGAGCAAAAACAAATGAAATCTTGCAAATGGAAGAA
CCTGGACTCCATGATAAACTCTTTCAGCTATTGGAGACATCTAAATCATTAACTGCCCCC
GCCCGCCCCCGGAATAAACAACATTGGGACCTAATCAGCCAATCCTTCCCCCCCATACCA
GGTGGAAACCATTCTTCTTGAATAT
GenBank Accession AL937826 [GenBank]
Graphic View Graphic view of gene At1g58390
Predicted Position of Insertion Chr1:21693732 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) X7J
Hit Gene Code At1g58390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (CC-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL937825 [GenBank]


Last Updated on 10.06.2021 13:37