SimpleSearch - Line and FST details


Line specific information

 
Line ID 090C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N408570)
Segregation Analysis 50:45:34
Confirmed for Hit At3g21770
Parent of DUPLO pair none
Parent of pair(s) 3443, 3492, 3524, 76321, 76348, 76461, 76488, 76803

Gene hit At3g21770

 
Sequence (A. th genome BLAST matches underlined) 
>11-011957-strizhov-C2-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCATTA
TAGGCTTGTCTTGAAGAGGAGAGGCTTGTTTCAGTCTGATTCTGCATTAACAACGAACTC
AGCGACTTTGAAGGTGATCAACGACTTGGTCAACGGTTCTGAAAAGAAGTTTTTCAAAGC
TTTTGCTAAGTCAATGGAGAAGATGGGGAGAGTTAAAGTGAAGACTGGCTCAGCTGGTGT
GATCAGGACACGGTGTTCTGTCGCTGGAAGTTAGTAAGCTTCAGGGTCGGAATGTGGTGT
GTTATGGTCATTTAATTTACAAATGTTGTTAATTTAATTTTGTTGTTGTTTGATTTGTGT
TTATGCACCCAAGAATGATGTGTTATGGTTCAATTAATATGTGAATCATTTAAATTTACA
ATAATTCTTATTATTCTGTATCTATGGGATCCTCCCTATAGTGAGTCGANTTA
GenBank Accession AL769638 [GenBank]
Graphic View Graphic view of gene At3g21770
Predicted Position of Insertion Chr3:7674444 - go to primer design
BLAST e Value 1e-133
Hit Clone Code (BAC ID) MSD21
Hit Gene Code At3g21770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37