SimpleSearch - Line and FST details


Line specific information

 
Line ID 090F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N408615)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At1g76530
Parent of DUPLO pair none
Parent of pair(s) 714, 11140, 58239

Gene hit At1g76530

 
Sequence (A. th genome BLAST matches underlined) 
>86-011957-strizhov-F11-8409
TTGATCCATGTAGCATTTCCCGGACATGAAGCACTTTACAATTGAATATATCTTTGAAAA
ACTCACTTTTCTCTGGCCTTGTTTCTTGTTGGCTGAGGAGATGGTGACCTTCCTGCTATT
ACCCTGATTCTTGTATGAAACTTACTTAAAGCGATTGAGGAGGTCGGATAGCGATGACTG
AGAAATGAATAAACTCCTGCTATTCTCTGCGGCTTGGTATACTTCACTACTTGTAGCTAC
CTTGATAGCGAGGGCTTTACTCGAGAGAGGAGCATACAAGTTGGATTTAGTAACCTCAGA
ACCCTTGTACCAATTCGTTCTTCTTCTTCAGTATGCTGTCCCACCAGCCATGAATCTATG
GGATCCTCCCTATAGTGAGTCGTTTTACTC
GenBank Accession AL769665 [GenBank]
Graphic View Graphic view of gene At1g76530
Predicted Position of Insertion Chr1:28719768 - go to primer design
BLAST e Value 3e-51
Hit Clone Code (BAC ID) F14G6
Hit Gene Code At1g76530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Auxin efflux carrier family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37