SimpleSearch - Line and FST details


Line specific information

 
Line ID 090F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N408616)
Segregation Analysis 50:37:26
Confirmed for Hit At2g39855
Parent of DUPLO pair none
Parent of pair(s) 12331

Gene hit At2g39855

 
Sequence (A. th genome BLAST matches underlined) 
>94-011957-strizhov-F12-8409
ATGATCCATGTAGCATTTCCCGGACATGAANGCCTTTAAGCGAGGTTCTCTCTCTGTCGT
CCTCTTTGCTGTTGGATCATATGTGTGGTACCAGAGGCTCTCGCTCGCATTCGTCCTCAT
ACTGCAGGATGGGTCAAATCCTTCTTCCCACCAGGCTTTATGGGTATATAGTGAACCAAT
ATAATACCGTGATACATGATCATTCTAAAAGATATAACACTAGGTTTCACGAAATGTTTC
TTTGGGCTCAACTCAAGGTGACGCAAGGGAACTCGACAAGTCGAAATGGAGCTGCCAAGT
ATCAACCTACAAATTTTGACACTCCAAGTGAGTGTACTGCTTACTCTATGGGATACTCCC
GGTAGGGAGTCGCTGTACTCACGACGTGGTTCCCAGATGTGGAAGCATCTCAGGACTGAC
CCTAAGCCGGTCCATTAACCAACTACATCATCGCGCCGATTAATGAGCCGGATCGAACAG
GAGAGAACACATGTGACTGGCCCCCTGATCGCTAGGGGATCGTCCCTATAGTGAGACGGA
TGACTCAGATTAGTCGCGTCGGGATGAGGTATGTGTTGATTTAGGGTTCATTTAATTCCT
GGGTTTCGGAATAGGATT
GenBank Accession AL769666 [GenBank]
Graphic View Graphic view of gene At2g39855
Predicted Position of Insertion Chr2:16637881 - go to primer design
BLAST e Value 3e-54
Hit Clone Code (BAC ID) T5I7
Hit Gene Code At2g39855 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant/protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37