SimpleSearch - Line and FST details
Line specific information
Line ID | 093E05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N408885) |
Segregation Analysis | 50:47:35 |
Confirmed for Hit | At1g48000 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g48000
Sequence (A. th genome BLAST matches underlined) | >37-011954-strizhov-E5-8409 ATGATCCATGGTAGATTTCCCGGACATGATAGCCTTTACAATTGATGTTAATCATTGTTA AGCACATGTCTATAGTTAAGAGTTGGATAAACTATCAAGTAAGTAAAAGTAACCGAAGAA GTAATTTAAATTAACATCATTTATTTATCGATATAATTTAGTTGATGCAACAAACCCTTT TTTCTGTAGTATATAATTTTGTTTAGTTTTGATTCAGGTTTCCTTTTATTAAACCAAACT ATGGGATCCTCCCTATAGTGAGTCGATTTACTCACTCCCTCATTAATTAAAATCTTTCTC AGAGCAATCTTCTCACAAGTTTCTAAGAATCTCAAAGCATGAATATAAGTAGAACAGAAT TCGCAAACTGTAAAACCCTTATAAATCATAAAGAAGAAGTCGAAGAAGTCGAGAAAAAGA TGGAAATAGAAATAAGGAGAGGTCCATGGACTGTGGAAGAAGACATGAAGCTCGTCAGTT ACATTTCTCTTCCCGGGGAAGGAAGATGGAACTCCCTCTCTCGTTCTGCTGNAACTTTCT TAGGCCTTTTGCATATATATTTACCGAAATATGGGATCATGCCTGATATATTATATG |
GenBank Accession | CR770121 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:17706657 - go to primer design |
BLAST e Value | 2e-150 |
Hit Clone Code (BAC ID) | T2J15 |
Hit Gene Code | At1g48000 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | myb domain protein 112 |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |